Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq37 129 5e-25 seq23 100 2e-16 seq34 89.7 4e-13 >seq37 Length=2347807 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| |||||||||||||| || || |||||| |||||||| || Sbjct 2331131 GTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTG 2331190 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || |||||||||||||| || |||||||||||||| || || Sbjct 2331191 CTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 2331250 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||||||||||| || | || || ||||| Sbjct 2331251 GGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGT 2331310 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || |||||||| Sbjct 2331311 GAGGGTTTTCACGAAGATCTGCAT 2331334 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607 ||||| ||||||||||| ||| | ||||| |||||| || || || ||||| || Sbjct 2330916 TCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 2330975 Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667 || || |||||||| || || || || |||||||| ||| ||| || || || | Sbjct 2330976 ATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTG 2331035 Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 || | ||| || | | ||||||||||| ||| | || ||||| || |||||||| || Sbjct 2331036 TCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACG 2331095 Query 118728 AAAATCTGCATG 118739 || ||||||||| Sbjct 2331096 AAGATCTGCATG 2331107 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | || | |||||||| | || |||||| || |||||||| || Sbjct 2330424 CCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAG 2330483 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||||| ||||| ||||| || | ||||| |||||||| || ||||| Sbjct 2330484 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGA 2330543 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||||||||| || ||| || || || | |||| ||||||| |||||| Sbjct 2330544 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACT 2330603 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | || |||||||| || || || || ||||| ||||| Sbjct 2330604 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607 ||||| ||||||||||| || | ||||| |||||| || || || ||||| || Sbjct 2330688 TCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 2330747 Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667 || || ||||||||||| ||||| ||||||||||| || || || || || | Sbjct 2330748 ATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTA 2330807 Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 |||| ||||||| ||||||||| | ||| | || |||||||| || || || || Sbjct 2330808 TCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACG 2330867 Query 118728 AAAATCTGCAT 118738 ||||| ||||| Sbjct 2330868 AAAATTTGCAT 2330878 >seq23 Length=3455761 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | ||||| ||| | |||| || ||| || || |||||||| ||| Sbjct 479355 ACCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 479414 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | |||||| |||||||||||| || || ||| | || | |||||||| || || || Sbjct 479415 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGG 479474 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 ||||| |||||||| || || || || | || | |||||| | ||| || Sbjct 479475 GATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCAC 479534 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 ||| | ||| | || ||||| || || || || || || |||||||||| Sbjct 479535 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGG 479584 >seq34 Length=2752027 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||||||||| ||| | ||| || |||||| ||||| || |||||| |||| Sbjct 472592 TTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 472533 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || || || |||||||||||||| || || || || | ||| Sbjct 472532 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 472473 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||| || | ||| ||||| | ||| | || ||||| ||||| || || || || Sbjct 472472 ATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 472414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830204369604