Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq23 123 3e-23
seq37 107 2e-18
seq34 98.7 1e-15
>seq23
Length=3455761
Score = 123 bits (136), Expect = 3e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|| ||| | ||| | ||||||||||| || || ||||| || | ||||| || | ||
Sbjct 479370 CAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATC 479429
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||| || ||||| || | |||||||||||| | || | || ||||||||
Sbjct 479430 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 479489
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || |||| | | | ||||||||||| ||||| || | ||||| ||
Sbjct 479490 CTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGT 479549
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||||| || ||||| || ||||| |||||
Sbjct 479550 CTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582
>seq37
Length=2347807
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| ||||| || | || ||| || |||| || || ||||| ||||| ||
Sbjct 2331143 CTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 2331202
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || |||||||| |||| || | || |||||||||| ||| || |||| |||
Sbjct 2331203 GATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 2331261
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || || || |||| |||||||| || || || || || || |
Sbjct 2331262 TGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCA 2331321
Query 43171 CAAAGATTTGCAT 43183
| ||||| |||||
Sbjct 2331322 CGAAGATCTGCAT 2331334
Score = 105 bits (116), Expect = 8e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| |||| |||||||| || || || ||||| |||| ||||| || |||| ||
Sbjct 2330442 ACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCC 2330501
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||| || || || ||||| ||||||||||| | || | || |||||| ||| ||
Sbjct 2330502 AGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC-TG 2330560
Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
| | || | || | | | | ||||| ||| || || || | ||||| || ||
Sbjct 2330561 AATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTT 2330620
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| || || ||||||||
Sbjct 2330621 GCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
>seq34
Length=2752027
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| ||||| ||||| || | ||||| || | || || |||||||| |||||||| |
Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | || ||| || ||||| || | |||||||| |||||||| || ||||| || |
Sbjct 472474 CGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 472415
Query 43174 AG 43175
||
Sbjct 472414 AG 472413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817335534360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |