Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq17 302 4e-77
seq12 154 1e-32
seq37 93.3 4e-14
seq34 84.2 2e-11
seq23 84.2 2e-11
>seq17
Length=408792
Score = 302 bits (334), Expect = 4e-77
Identities = 1130/1752 (64%), Gaps = 53/1752 (3%)
Strand=Plus/Plus
Query 22247 GACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATC 22306
||||| ||| || || || || || |||||||||||||| | | | || | |
Sbjct 104772 GACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACGACGGTCCTCTGT 104831
Query 22307 GACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCC 22364
|| |||||||| |||||||||||||| | ||| || || || ||| | ||
Sbjct 104832 GAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAAT--ATTGGGGATGT 104889
Query 22365 TCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGA 22424
|||| ||||| ||||| | | || || ||| || || | || ||| | ||| |
Sbjct 104890 TCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGACCAGAGACCCA 104949
Query 22425 TGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGC 22484
|| || || || |||| || |||| || || || || ||||| | || || |
Sbjct 104950 TGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCAGCCAGAACAC 105009
Query 22485 GGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAG 22544
| || |||||||||||| ||| | || ||||| | |||||||| ||||| |||||||
Sbjct 105010 GACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGAG 105069
Query 22545 CGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGA 22602
||| ||||| || ||||| ||||||| || | ||| | | || || | ||||
Sbjct 105070 AGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACCATGTTCCTTGA 105129
Query 22603 AATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACAT 22662
| | | || || | ||| ||||| || || || || || || || ||||||
Sbjct 105130 --TCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGTT---CCACAT 105184
Query 22663 ATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCA 22720
|| || || | | || | || | || ||||||||| || ||| |||||
Sbjct 105185 GTCATACTGGAGGATACCCTTGGAGACA--GGAGAGCCTTCGTAGGTGGAGTAGGGACCC 105242
Query 22721 TA---TATCGCGGCAAGTTC--GCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGA 22775
| | | ||| | |||| | || ||| ||| || | | || | |||||||
Sbjct 105243 TGCTCTTTGGCG--AGGTTCATGGAG---GCCGTCAATGCAGCATGGTAGAGGGTCTCGA 105297
Query 22776 AGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACGGCATACGCATCATC 22831
|||| | |||||||| | ||| || ||| ||| | ||||| || | |
Sbjct 105298 AGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGAC----TCGAAGGGCATGCGGAGAGCC 105353
Query 22832 ACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGAC 22891
| ||| ||||| || | |||||| || || | ||| | ||||||| | || ||| |
Sbjct 105354 AAGAAAGCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTG--C 105411
Query 22892 ACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGG 22949
|| |||||| || | ||| || || ||||| | |||||| || |
Sbjct 105412 TGTTCCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAA 105471
Query 22950 TCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGA-TTGTA--CAA 23006
|| | | || | | |||||| || |||||| ||||| |||
Sbjct 105472 CAACGACCTGTGTGACCTCATGAAGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAA 105531
Query 23007 CAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA-CGT- 23064
| ||| | | || || || || || ||||| || || ||||| || ||| ||
Sbjct 105532 CGAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCA--GGAGCGCA 105589
Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124
|||||| | || || || || |||||| | || ||||| | || |||||||
Sbjct 105590 GTACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTT 105649
Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184
||| || || ||||| ||||||||||||||| | || | || |||||| |||||
Sbjct 105650 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGC 105709
Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGT-GAAC-ACGTCGCACGTACCTGCCTTCT 23242
||||| ||| || ||| | |||| || | || | || | | ||| ||| |
Sbjct 105710 CTCGAGGATGGCATACCAGAGCTTCTGGGCCTTGATCGACTTGCCGCGTCCCT-----CG 105764
Query 23243 TCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGG 23301
||||||| || | ||||| || || || || | ||||| ||| || ||||| || ||
Sbjct 105765 GCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACA-TCAGCCAGACCAGG 105823
Query 23302 CGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAG 23361
| | | || ||||| | | |||| || | || || || |||| || ||
Sbjct 105824 GCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAG 105883
Query 23362 ATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTT 23421
||| || ||||| |||||| ||| || ||||| || || || ||||| |||||| |||
Sbjct 105884 ATCAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTT 105943
Query 23422 CTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAA 23481
||| | ||| | ||| || || || ||||| ||||| ||||| ||||| | || ||
Sbjct 105944 CTTACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAA 106003
Query 23482 CGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCT 23541
|| || || | ||| ||||| |||||||||||||| | || ||||||||| | || |
Sbjct 106004 GGCACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACG 106063
Query 23542 TAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGC 23601
||||| || || | ||||| || | ||| ||| || | ||||| | ||
Sbjct 106064 CAGCATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGC 106123
Query 23602 TCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTG 23661
|||| | ||||| | || || ||||| || || || || ||||| || ||
Sbjct 106124 ACGAATGCGATGAACATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGT 106183
Query 23662 TTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGA 23721
||||| ||||| ||||| ||||||||||||||||| || | |||||| || || ||
Sbjct 106184 CTTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGA 106243
Query 23722 AGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA 23781
||||| ||| || | || ||| | || ||| ||||| || || || || |||||
Sbjct 106244 AGACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTA 106303
Query 23782 TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACC 23841
| ||||| || |||||||| |||||| | || | || || || |||||
Sbjct 106304 CTTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACC 106363
Query 23842 GATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAA 23901
| || || ||||| ||||| | || || | ||| | | |||||| | || |
Sbjct 106364 AACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAG 106423
Query 23902 CAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTG 23961
|| ||||| || | || || || || ||||| || | ||||| || || ||||| |
Sbjct 106424 GAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCGATCATA 106483
Query 23962 CACTATGGCCGA 23973
|| ||||| ||
Sbjct 106484 GACAATGGCTGA 106495
>seq12
Length=3698523
Score = 154 bits (170), Expect = 1e-32
Identities = 304/443 (69%), Gaps = 14/443 (3%)
Strand=Plus/Plus
Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|||| |||||| || | || || || ||||||||||| || || || ||||| ||
Sbjct 322352 CCACCTTCGCCCAGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGT- 322410
Query 58018 GCTTT-GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGC 58076
||||| || | || || ||| ||||||| ||||| || ||||||||| |||| ||| |
Sbjct 322411 GCTTTCGCATCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCC 322470
Query 58077 AACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCT 58136
|||||| | || || |||||||| ||||| || || |||||||| ||| || ||| |||
Sbjct 322471 AACGAGCTCATTTCTCGCGACGAAGGTCTGCACACCGATTTTGCCTGCTTACTGTTCTCC 322530
Query 58137 CACATTGTCAATAAACCGACGCGG----GATCGCATCTTGGACATTATCACCGAGGCGGT 58192
|| | | || | ||| | || ||| |||| || | ||| ||| || ||
Sbjct 322531 CA---TCTGAAGCA-CCGTCCTGGCAAGGATGTCATCGAGGCTGTCATCGTCGACGCTGT 322586
Query 58193 CGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAA 58252
| ||||||| | || || | ||||||||| | || || | || || ||||||
Sbjct 322587 CAAGATCGAACAAGAATTCTTGACCGAAGCCTTGCCTTGTGCTCTTCTTGGCATGAACGC 322646
Query 58253 TGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATT 58310
||| | ||| |||| || ||||||||||||||| | || || ||| || |
Sbjct 322647 GGATCTCATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCAA 322706
Query 58311 GGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAG 58370
|| | ||| ||| || ||| || || || || ||| | ||||||||||
Sbjct 322707 CGACAAGGTC--TACCGTTCGTCAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGT 322764
Query 58371 GGCAAGACAAACTTTTTCGAAAA 58393
|||||||| ||||||||||| ||
Sbjct 322765 GGCAAGACCAACTTTTTCGAGAA 322787
>seq37
Length=2347807
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| || |||||| | || || || ||||
Sbjct 2330650 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCG 2330591
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | || || || || ||| ||||| ||| | || || ||||||
Sbjct 2330590 GACACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAG 2330531
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
||||| || || || || || || ||| |||| |||
Sbjct 2330530 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGAC 2330495
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || || || || ||||| |||| || || | |||
Sbjct 2331334 ATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2331275
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || ||||| |||
Sbjct 2331274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 2331215
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || |||||||| || | || ||| ||| || || || |||
Sbjct 2331214 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAAC 2331155
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|||||||| || ||||| || || || || |||
Sbjct 2331154 ATTCAAAAGGAGTCGACCCTCCACCTTGTCCTT 2331122
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| || |||||| | || || || ||||
Sbjct 2330878 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTCG 2330819
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | || || || || ||| ||||| ||| | || || || |||
Sbjct 2330818 GACACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCAG 2330759
Query 31313 CAGCGTCTAATATTCGCTGGCAAACA 31338
||||| || || || |||||||| ||
Sbjct 2330758 CAGCGCCTTATCTTTGCTGGCAAGCA 2330733
>seq34
Length=2752027
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| ||||| ||||| || |||||| | || || || | ||||| | ||
Sbjct 472414 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCCGATACCATC 472473
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||| ||| | || || ||||||||||| ||
Sbjct 472474 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 472533
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||||||||||| ||| | || ||
Sbjct 472534 ATCTTCGCTGGCAAGCAGCTTGAGGA 472559
>seq23
Length=3455761
Score = 84.2 bits (92), Expect = 2e-11
Identities = 165/244 (68%), Gaps = 4/244 (2%)
Strand=Plus/Minus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
||| |||||| || ||||| ||||| || || ||||| || |||||| | || || ||
Sbjct 479587 CAACCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGT 479528
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
|| ||||| | || | ||||| | || ||||||||||||| | || || |
Sbjct 479527 CGAGCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGG 479468
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||||||||| | || ||||| ||||| ||| | || || ||| | ||| |
Sbjct 479467 ACCAGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACT 479408
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGA 31423
| ||||| || || || || || ||||| || || ||||| | || ||| |||
Sbjct 479407 ACAACATCCAGAAGGAGAGCACCCTCCATCTCGTGCTGAGACTCCGTGGAGGTGCTAAGA 479348
Query 31424 AGCG 31427
||||
Sbjct 479347 AGCG 479344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766193833040
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