Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq17 302 4e-77 seq12 154 1e-32 seq37 93.3 4e-14 seq34 84.2 2e-11 seq23 84.2 2e-11 >seq17 Length=408792 Score = 302 bits (334), Expect = 4e-77 Identities = 1130/1752 (64%), Gaps = 53/1752 (3%) Strand=Plus/Plus Query 22247 GACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATC 22306 ||||| ||| || || || || || |||||||||||||| | | | || | | Sbjct 104772 GACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACGACGGTCCTCTGT 104831 Query 22307 GACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCC 22364 || |||||||| |||||||||||||| | ||| || || || ||| | || Sbjct 104832 GAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAAT--ATTGGGGATGT 104889 Query 22365 TCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGA 22424 |||| ||||| ||||| | | || || ||| || || | || ||| | ||| | Sbjct 104890 TCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGACCAGAGACCCA 104949 Query 22425 TGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGC 22484 || || || || |||| || |||| || || || || ||||| | || || | Sbjct 104950 TGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCAGCCAGAACAC 105009 Query 22485 GGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAG 22544 | || |||||||||||| ||| | || ||||| | |||||||| ||||| ||||||| Sbjct 105010 GACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGAG 105069 Query 22545 CGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGA 22602 ||| ||||| || ||||| ||||||| || | ||| | | || || | |||| Sbjct 105070 AGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACCATGTTCCTTGA 105129 Query 22603 AATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACAT 22662 | | | || || | ||| ||||| || || || || || || || |||||| Sbjct 105130 --TCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGTT---CCACAT 105184 Query 22663 ATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCA 22720 || || || | | || | || | || ||||||||| || ||| ||||| Sbjct 105185 GTCATACTGGAGGATACCCTTGGAGACA--GGAGAGCCTTCGTAGGTGGAGTAGGGACCC 105242 Query 22721 TA---TATCGCGGCAAGTTC--GCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGA 22775 | | | ||| | |||| | || ||| ||| || | | || | ||||||| Sbjct 105243 TGCTCTTTGGCG--AGGTTCATGGAG---GCCGTCAATGCAGCATGGTAGAGGGTCTCGA 105297 Query 22776 AGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACGGCATACGCATCATC 22831 |||| | |||||||| | ||| || ||| ||| | ||||| || | | Sbjct 105298 AGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGAC----TCGAAGGGCATGCGGAGAGCC 105353 Query 22832 ACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGAC 22891 | ||| ||||| || | |||||| || || | ||| | ||||||| | || ||| | Sbjct 105354 AAGAAAGCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTG--C 105411 Query 22892 ACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGG 22949 || |||||| || | ||| || || ||||| | |||||| || | Sbjct 105412 TGTTCCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAA 105471 Query 22950 TCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGA-TTGTA--CAA 23006 || | | || | | |||||| || |||||| ||||| ||| Sbjct 105472 CAACGACCTGTGTGACCTCATGAAGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAA 105531 Query 23007 CAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA-CGT- 23064 | ||| | | || || || || || ||||| || || ||||| || ||| || Sbjct 105532 CGAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCA--GGAGCGCA 105589 Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124 |||||| | || || || || |||||| | || ||||| | || ||||||| Sbjct 105590 GTACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTT 105649 Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184 ||| || || ||||| ||||||||||||||| | || | || |||||| ||||| Sbjct 105650 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGC 105709 Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGT-GAAC-ACGTCGCACGTACCTGCCTTCT 23242 ||||| ||| || ||| | |||| || | || | || | | ||| ||| | Sbjct 105710 CTCGAGGATGGCATACCAGAGCTTCTGGGCCTTGATCGACTTGCCGCGTCCCT-----CG 105764 Query 23243 TCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGG 23301 ||||||| || | ||||| || || || || | ||||| ||| || ||||| || || Sbjct 105765 GCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACA-TCAGCCAGACCAGG 105823 Query 23302 CGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAG 23361 | | | || ||||| | | |||| || | || || || |||| || || Sbjct 105824 GCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAG 105883 Query 23362 ATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTT 23421 ||| || ||||| |||||| ||| || ||||| || || || ||||| |||||| ||| Sbjct 105884 ATCAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTT 105943 Query 23422 CTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAA 23481 ||| | ||| | ||| || || || ||||| ||||| ||||| ||||| | || || Sbjct 105944 CTTACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAA 106003 Query 23482 CGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCT 23541 || || || | ||| ||||| |||||||||||||| | || ||||||||| | || | Sbjct 106004 GGCACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACG 106063 Query 23542 TAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGC 23601 ||||| || || | ||||| || | ||| ||| || | ||||| | || Sbjct 106064 CAGCATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGC 106123 Query 23602 TCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTG 23661 |||| | ||||| | || || ||||| || || || || ||||| || || Sbjct 106124 ACGAATGCGATGAACATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGT 106183 Query 23662 TTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGA 23721 ||||| ||||| ||||| ||||||||||||||||| || | |||||| || || || Sbjct 106184 CTTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGA 106243 Query 23722 AGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA 23781 ||||| ||| || | || ||| | || ||| ||||| || || || || ||||| Sbjct 106244 AGACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTA 106303 Query 23782 TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACC 23841 | ||||| || |||||||| |||||| | || | || || || ||||| Sbjct 106304 CTTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACC 106363 Query 23842 GATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAA 23901 | || || ||||| ||||| | || || | ||| | | |||||| | || | Sbjct 106364 AACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAG 106423 Query 23902 CAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTG 23961 || ||||| || | || || || || ||||| || | ||||| || || ||||| | Sbjct 106424 GAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCGATCATA 106483 Query 23962 CACTATGGCCGA 23973 || ||||| || Sbjct 106484 GACAATGGCTGA 106495 >seq12 Length=3698523 Score = 154 bits (170), Expect = 1e-32 Identities = 304/443 (69%), Gaps = 14/443 (3%) Strand=Plus/Plus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| |||||| || | || || || ||||||||||| || || || ||||| || Sbjct 322352 CCACCTTCGCCCAGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGT- 322410 Query 58018 GCTTT-GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGC 58076 ||||| || | || || ||| ||||||| ||||| || ||||||||| |||| ||| | Sbjct 322411 GCTTTCGCATCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCC 322470 Query 58077 AACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCT 58136 |||||| | || || |||||||| ||||| || || |||||||| ||| || ||| ||| Sbjct 322471 AACGAGCTCATTTCTCGCGACGAAGGTCTGCACACCGATTTTGCCTGCTTACTGTTCTCC 322530 Query 58137 CACATTGTCAATAAACCGACGCGG----GATCGCATCTTGGACATTATCACCGAGGCGGT 58192 || | | || | ||| | || ||| |||| || | ||| ||| || || Sbjct 322531 CA---TCTGAAGCA-CCGTCCTGGCAAGGATGTCATCGAGGCTGTCATCGTCGACGCTGT 322586 Query 58193 CGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAA 58252 | ||||||| | || || | ||||||||| | || || | || || |||||| Sbjct 322587 CAAGATCGAACAAGAATTCTTGACCGAAGCCTTGCCTTGTGCTCTTCTTGGCATGAACGC 322646 Query 58253 TGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATT 58310 ||| | ||| |||| || ||||||||||||||| | || || ||| || | Sbjct 322647 GGATCTCATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCAA 322706 Query 58311 GGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAG 58370 || | ||| ||| || ||| || || || || ||| | |||||||||| Sbjct 322707 CGACAAGGTC--TACCGTTCGTCAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGT 322764 Query 58371 GGCAAGACAAACTTTTTCGAAAA 58393 |||||||| ||||||||||| || Sbjct 322765 GGCAAGACCAACTTTTTCGAGAA 322787 >seq37 Length=2347807 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || |||||| | || || || |||| Sbjct 2330650 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCG 2330591 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || || || ||| ||||| ||| | || || |||||| Sbjct 2330590 GACACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAG 2330531 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || || || || || ||| |||| ||| Sbjct 2330530 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGAC 2330495 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || || || || ||||| |||| || || | ||| Sbjct 2331334 ATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2331275 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||| ||| Sbjct 2331274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 2331215 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || |||||||| || | || ||| ||| || || || ||| Sbjct 2331214 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAAC 2331155 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||| || ||||| || || || || ||| Sbjct 2331154 ATTCAAAAGGAGTCGACCCTCCACCTTGTCCTT 2331122 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || |||||| | || || || |||| Sbjct 2330878 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTCG 2330819 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || || || ||| ||||| ||| | || || || ||| Sbjct 2330818 GACACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCAG 2330759 Query 31313 CAGCGTCTAATATTCGCTGGCAAACA 31338 ||||| || || || |||||||| || Sbjct 2330758 CAGCGCCTTATCTTTGCTGGCAAGCA 2330733 >seq34 Length=2752027 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| ||||| ||||| || |||||| | || || || | ||||| | || Sbjct 472414 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCCGATACCATC 472473 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||| ||| | || || ||||||||||| || Sbjct 472474 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 472533 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||||||||| ||| | || || Sbjct 472534 ATCTTCGCTGGCAAGCAGCTTGAGGA 472559 >seq23 Length=3455761 Score = 84.2 bits (92), Expect = 2e-11 Identities = 165/244 (68%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| ||||| || || ||||| || |||||| | || || || Sbjct 479587 CAACCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGT 479528 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 || ||||| | || | ||||| | || ||||||||||||| | || || | Sbjct 479527 CGAGCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGG 479468 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| | || ||||| ||||| ||| | || || ||| | ||| | Sbjct 479467 ACCAGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACT 479408 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGA 31423 | ||||| || || || || || ||||| || || ||||| | || ||| ||| Sbjct 479407 ACAACATCCAGAAGGAGAGCACCCTCCATCTCGTGCTGAGACTCCGTGGAGGTGCTAAGA 479348 Query 31424 AGCG 31427 |||| Sbjct 479347 AGCG 479344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766193833040