Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq12 129 1e-24
seq17 91.5 3e-13
>seq12
Length=3698523
Score = 129 bits (142), Expect = 1e-24
Identities = 121/154 (79%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
||||||| || || ||||| ||||||||||| |||||||| |||||||| || ||||||
Sbjct 322373 TTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTTCTGGT 322432
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| || |||| || | |||| ||||| ||| |||||||| | ||||
Sbjct 322433 TGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCGCGACG 322492
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||||||| || ||| ||||| ||| | |||||
Sbjct 322493 AAGGTCTGCACACCGATTTTGCCTGCTTACTGTT 322526
>seq17
Length=408792
Score = 91.5 bits (100), Expect = 3e-13
Identities = 183/269 (68%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832
||||| | || ||| | || || || |||| ||||| || || ||| || ||
Sbjct 106133 ATGAACATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGT 106192
Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892
||||| |||||||| ||||| || || | | | | | || ||||| || || |||||
Sbjct 106193 GTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTG 106252
Query 94893 GGGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951
|| ||| || ||| ||| || |||||||| || ||||| || || || | || |
Sbjct 106253 GGCC-TGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAG 106311
Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011
||||||| | || || || ||||| || || || || || || ||||| |
Sbjct 106312 ACATGAGGTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACCAACAGCAA 106371
Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCA 95040
||||||||||||| | ||| || ||||||
Sbjct 106372 CACGCATAATCATATGCTGCGGCCGCTCA 106400
Score = 89.7 bits (98), Expect = 1e-12
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458
|| || ||||| ||||||||||||| |||| ||||| ||||| | ||| || | ||
Sbjct 105759 CCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGA 105818
Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGC-CTTCACTCTCTCCAT 94517
||||||||||| | ||||||||| | | || | || | | || |||| || |||
Sbjct 105819 CCAGGGCACTCATTGGGGCACATTAAAGTCC-AGTCGCCGTTTCTCTCGACTCGCTTCAT 105877
Query 94518 GAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553
||||||||||| | ||| | ||| ||||||||||
Sbjct 105878 GAAGAGATCAGGAATCCAAAGAGCGAGGAAAAGATC 105913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583530875335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |