Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq12 129 1e-24 seq17 91.5 3e-13 >seq12 Length=3698523 Score = 129 bits (142), Expect = 1e-24 Identities = 121/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||| || || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 322373 TTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTTCTGGT 322432 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | ||| || |||| || | |||| ||||| ||| |||||||| | |||| Sbjct 322433 TGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCGCGACG 322492 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||||||| || ||| ||||| ||| | ||||| Sbjct 322493 AAGGTCTGCACACCGATTTTGCCTGCTTACTGTT 322526 >seq17 Length=408792 Score = 91.5 bits (100), Expect = 3e-13 Identities = 183/269 (68%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||||| | || ||| | || || || |||| ||||| || || ||| || || Sbjct 106133 ATGAACATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGT 106192 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 ||||| |||||||| ||||| || || | | | | | || ||||| || || ||||| Sbjct 106193 GTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTG 106252 Query 94893 GGGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 || ||| || ||| ||| || |||||||| || ||||| || || || | || | Sbjct 106253 GGCC-TGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAG 106311 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 ||||||| | || || || ||||| || || || || || || ||||| | Sbjct 106312 ACATGAGGTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACCAACAGCAA 106371 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCA 95040 ||||||||||||| | ||| || |||||| Sbjct 106372 CACGCATAATCATATGCTGCGGCCGCTCA 106400 Score = 89.7 bits (98), Expect = 1e-12 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 || || ||||| ||||||||||||| |||| ||||| ||||| | ||| || | || Sbjct 105759 CCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGA 105818 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGC-CTTCACTCTCTCCAT 94517 ||||||||||| | ||||||||| | | || | || | | || |||| || ||| Sbjct 105819 CCAGGGCACTCATTGGGGCACATTAAAGTCC-AGTCGCCGTTTCTCTCGACTCGCTTCAT 105877 Query 94518 GAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 ||||||||||| | ||| | ||| |||||||||| Sbjct 105878 GAAGAGATCAGGAATCCAAAGAGCGAGGAAAAGATC 105913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583530875335