Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq17 224 1e-53 seq12 93.3 6e-14 >seq17 Length=408792 Score = 224 bits (248), Expect = 1e-53 Identities = 1302/2063 (63%), Gaps = 48/2063 (2%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||| || || ||||| | || | | || | || |||||||| || || || || Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || || |||| ||| || ||||| || || | ||| | || ||| || Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 ||||| |||| ||| || || || |||||||| || | || || ||||| | | | Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 | ||| | |||| |||||||||| || || || | ||| | || | |||| Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 || | | ||||||| ||| || || || ||||| | |||||| || | ||| | Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| | | | ||||| || || || || || || || ||| Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | || || | |||| |||||| || || || || || | ||||||| || ||| Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 | || |||| || || ||||| ||||| || |||| ||| || || || | || ||| Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACC- 105118 Query 65316 TATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 65373 |||||| |||| | | |||| || | ||||||| ||| || || || || ||| Sbjct 105119 -ATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGT 105177 Query 65374 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 65433 || || ||||| || | | || ||| | || || ||| | Sbjct 105178 TCCACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGG 105237 Query 65434 GTCCTTCCTTCTCAGCTAG-TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 65492 | || | || | || || |||| | || |||||| | | || | ||| ||| Sbjct 105238 GACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCG 105296 Query 65493 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG-ATAATTTAAGAGAAT 65551 ||||||| ||| || || | | || || | || || || || || || Sbjct 105297 AAGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAG 105356 Query 65552 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 65611 ||| ||||| || | || || ||||||| ||| | ||||| |||| | |||| | | Sbjct 105357 AAA-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTGCTGTT 105415 Query 65612 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT 65671 || || || | ||| || | || | || ||||| || || ||||| | |||| Sbjct 105416 CCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAAC 105475 Query 65672 TACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCTCA---TCTATT--AC 65722 || | ||||| ||| || || |||| ||| | || | | || | || Sbjct 105476 GACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAAC 105532 Query 65723 AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-T 65781 ||| | ||| || | |||||||| || || || || ||||||| || | | ||| | Sbjct 105533 GAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGC-GCAGT 105591 Query 65782 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 65841 | | || ||||| ||||||||||| | |||||| || | || | || || | Sbjct 105592 ACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 105651 Query 65842 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 65901 |||| ||| || |||||| || || || || || ||||||| || |||| | | Sbjct 105652 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCT 105711 Query 65902 CTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT 65960 | | || || | ||||| | || | ||||| || || ||| | | | ||| Sbjct 105712 CGAGGATGGCATACCAGA-GCTTCTGGGCCTTGATC---GACTTGC--CGCGTCCCTCGG 105765 Query 65961 --TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 66018 |||||| |||| |||||||| || || | |||| ||| ||||| | Sbjct 105766 CCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGC 105825 Query 66019 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 66078 | |||| || ||||| || | ||| || |||| || ||||| ||||| ||||||| Sbjct 105826 ACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGAT 105885 Query 66079 CAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 66138 |||||||||||||||| | || | ||| | | | |||||| || || |||| Sbjct 105886 CAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCT 105945 Query 66139 TTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAA 66198 | ||||| || ||| | | | ||| ||||| || || | ||| || || | Sbjct 105946 TACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGG 106005 Query 66199 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 66258 | || || || ||||| || |||||||| | |||||| || ||||| || | || | || Sbjct 106006 CACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCA 106065 Query 66259 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCAC 66318 ||| || | ||| || || ||||| || || || || | || || ||| | |||| Sbjct 106066 GCATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCAC 106125 Query 66319 GAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 66376 |||| | | |||| || || || || |||||||| || ||||| | || || Sbjct 106126 GAATGCGATGAACATTG--AGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGT 106183 Query 66377 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 66436 || | || |||||||| ||||| || || || ||| |||||| | ||||| ||| Sbjct 106184 CTTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGA 106243 Query 66437 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 66496 ||||| |||| || ||| || ||||| || | || ||||| || || || || | Sbjct 106244 AGACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTA 106303 Query 66497 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATT 66554 || ||| | || ||||||||||| || | || | || ||| | || Sbjct 106304 CTTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATA 106361 Query 66555 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 66614 || || || |||||||| | ||| ||||| || | ||| | || ||| ||| | ||| Sbjct 106362 CCAACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTC 106421 Query 66615 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 66672 | | ||| ||| |||| || || || ||||| || | ||| ||||| ||||| | Sbjct 106422 AGGAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCGAT 106479 Query 66673 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAATA 66731 | || | ||| | |||| |||| ||||| | || | || || ||| | | Sbjct 106480 CATAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGACCGAGTCATATGTTTGT- 106538 Query 66732 CTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCC 66791 || || || || || | || || || || |||||||||| | ||| ||| Sbjct 106539 TGGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGATCGCTT 106598 Query 66792 ATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCG 66851 | ||| | || | || ||||||| ||||| || || |||||||| || | || Sbjct 106599 ACGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGCGGGCC 106658 Query 66852 GCTATAATGGCATAATCCGGATG 66874 || | ||||||||| || || || Sbjct 106659 GCAAGAATGGCATAGTCTGGGTG 106681 >seq12 Length=3698523 Score = 93.3 bits (102), Expect = 6e-14 Identities = 154/220 (70%), Gaps = 7/220 (3%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || || || |||||| ||| ||||| ||||| | | ||| | ||||||||| Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || | |||||||| || || ||||| || | ||| || || || || || | ||| Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 ||||| ||||| || || || || |||||||| || | || | || | | | Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGC-GAAGGTGGAGT- 322349 Query 36329 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 || ||| |||||||| ||||||| ||||||||||| Sbjct 322348 TCTTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172495595080