Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq17 257 2e-63 seq12 113 6e-20 >seq17 Length=408792 Score = 257 bits (284), Expect = 2e-63 Identities = 1318/2068 (64%), Gaps = 58/2068 (3%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| || || ||||| | || | | || | || |||||||| || || || || Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || |||| ||| ||| ||||| || || | ||| | || ||| || Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 ||||| |||| ||| || || || |||||||| || | || || ||||| | | | Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 | ||| | |||| |||||||||| || || || | ||| | || | |||| Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | | ||||||| ||| || || || ||||| | |||||| || | ||| | Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | ||| | | | ||||| || || || || || || || ||| Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | || || | |||| |||||| || || || || || | | ||||| || ||| Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | || |||| || || || || ||||| || |||| ||| || || || | || ||| Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACC- 105118 Query 79195 TATGATC--TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| || |||| | | |||| || || ||||||||||| || ||||| || ||| | Sbjct 105119 -ATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGT 105177 Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAG 79312 |||| | ||||| || || ||||| || | || ||| ||| || || | Sbjct 105178 TCCACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGG 105237 Query 79313 GTCCTTCCTTTTCGGCTAA-TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCG 79371 | || | || || ||| | |||| | || ||||| | | || | ||| ||| Sbjct 105238 GACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCG 105296 Query 79372 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG-ATAATTTAAGAGAAT 79430 || |||| ||| || || | | || ||| | || || || || || || Sbjct 105297 AAGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAG 105356 Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490 ||| ||||| || | || || ||||||| ||| | ||||| |||| | |||| | | Sbjct 105357 AAA-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATT-GCTGT 105414 Query 79491 TTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549 | | || || || | ||| || | || | || ||||| || || ||||| | || | Sbjct 105415 TCCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAA 105474 Query 79550 TTACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCA-----TCTATT-- 79599 || | ||||| ||| || || |||| ||| | ||| | | || | Sbjct 105475 CGACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATA-CGTGCCCGAGTTGTAATCA 105530 Query 79600 ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 79659 || ||| | ||| || | |||||||| || || || || ||||||| || | | ||| Sbjct 105531 ACGAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGC-GCA 105589 Query 79660 -TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 || | || || || ||||| || || | ||||| || | || | || || Sbjct 105590 GTACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTT 105649 Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778 ||||| ||| || |||||| || || || || || ||||||| || |||| | Sbjct 105650 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGC 105709 Query 79779 TTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCTCTTTTCTC 79837 || | || || | ||||| | || | ||||| || |||||| | | | ||| Sbjct 105710 CTCGAGGATGGCATACCAGA-GCTTCTGGGCCTTGATC---GACTTGC--CGCGTCCCTC 105763 Query 79838 TT--TCGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 ||||||| ||| | | | |||||||| || || | ||||| | | ||| Sbjct 105764 GGCCTCGTATTTCTCGTACAGAGCC--TCGAACTCATCGCCGTAGACATCAGCCAGACCA 105821 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 || || || | || ||||| || | ||| || || | || ||||| ||||| ||| Sbjct 105822 GGGCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAG 105881 Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013 |||||||||||||||||||| | || ||||| | | | ||||| || || Sbjct 105882 AGATCAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGG 105941 Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073 ||||| ||||| || ||| | | | ||| | ||||| || || | ||| || || Sbjct 105942 TTCTTACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCG 106001 Query 80074 ATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 80133 | | || || || ||||| || |||||||| | |||||| || ||||| || | || Sbjct 106002 AAGGCACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACA 106061 Query 80134 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTG 80193 | || ||| || | ||| || || ||||| || || || || | || || ||| | Sbjct 106062 CGCAGCATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTC 106121 Query 80194 GCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 80251 |||||||| | || |||| | || || || |||||||| || ||||| | || | Sbjct 106122 GCACGAATGCGATGAACATTGA--GGCCAATGCCACCTGCCATCTTTGAGATCATGGCAC 106179 Query 80252 ATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAAC 80311 | || | || |||||||| ||||| ||||| || || |||||| | ||||| | Sbjct 106180 AGGTCTTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGC 106239 Query 80312 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 80371 || ||||| |||| || ||| || ||||| || | || ||||| || || || | Sbjct 106240 AGGAAGACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGA 106299 Query 80372 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATG 80429 | | || ||||| || ||||||||||| || | ||| | || ||| | Sbjct 106300 AGTACTTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCA 106357 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489 || || || || |||||||| | ||| ||||| || | ||| | || ||| || | Sbjct 106358 GATACCAACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAG 106417 Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 80547 |||| | ||| ||| |||| || || || ||||| || | ||| ||||| ||| Sbjct 106418 CTTCAGGAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCT 106475 Query 80548 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTG 80607 || || || | ||| | |||| |||| ||||| | || | || | ||| || Sbjct 106476 CGATCATAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGAC-CGAGTCAT-ATG 106533 Query 80608 ATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 80665 | || || || || || || | || || || || || ||||||| | ||| || Sbjct 106534 TTTGTTGGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGAT 106593 Query 80666 CCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTC 80725 | | ||| | || | || ||||||| |||||| || || |||||||| || | Sbjct 106594 CGCTTACGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGC 106653 Query 80726 TGGCGGCTAAAATGGCATAATCTGGATG 80753 ||| || | ||||||||| ||||| || Sbjct 106654 GGGCCGCAAGAATGGCATAGTCTGGGTG 106681 >seq12 Length=3698523 Score = 113 bits (124), Expect = 6e-20 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || |||||| ||||||||| ||||| | | ||| || ||||||||| Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || | |||||||| || || ||||| || | ||| || || || || || | ||| Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--- 50127 ||||||||||| || || ||||| ||||||| || | || | | ||| | Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTC 322347 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 |||| |||||||| ||||||| ||||||||||| Sbjct 322346 TTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268467800680