Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq17 232 9e-56 seq12 102 1e-16 >seq17 Length=408792 Score = 232 bits (256), Expect = 9e-56 Identities = 1300/2062 (63%), Gaps = 46/2062 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || ||||| || |||| | || || | || | || |||||||||||||| || || Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || || |||| ||| || ||||| || || | ||| | | || || ||| Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || |||| ||||| || || |||||||| || | || || ||||| | | | Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 | ||| | |||| |||||||||| || || || | ||| | || | |||| Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 || | | ||||||| ||| || || |||||||| | ||| || || | ||| | Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939 Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157 || | | ||| | | | ||||| || || || || || || || ||| Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999 Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217 | || || | ||||| |||||| || || || || || | ||||||| || ||| Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059 Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCA 71277 | || |||| || || ||||| ||||| || |||| ||| | || || | || |||| Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACCA 105119 Query 71278 TGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNN 71337 ||| ||| | | |||| || || ||||||| ||| || || ||||| ||| Sbjct 105120 TGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGTTC 105179 Query 71338 NNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGT 71397 || || || | || ||| | || || ||| || Sbjct 105180 CACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGGGA 105239 Query 71398 CCTTCTTTTTCGGCTAG-TTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAA 71456 || | | || ||| || |||| | || ||||| ||| || | ||| ||||| Sbjct 105240 CCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCGAA 105298 Query 71457 AATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGG-ATAATTTAAGAGAATAA 71515 |||| ||| || || | | || || || || || || || || || || Sbjct 105299 GATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAGAA 105358 Query 71516 ACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTT 71575 | ||||| || | || || || |||| ||| | ||||| ||||| | |||| | || Sbjct 105359 A-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATT-GCTGTTC 105416 Query 71576 CA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATT 71634 | || || || | ||| || | || | || ||||| || || ||||| | || | Sbjct 105417 CGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAACG 105476 Query 71635 ACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCA----TCTATT--ACA 71685 || | ||||| ||| || || |||| ||| | | || | || | || Sbjct 105477 ACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAACG 105533 Query 71686 AACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATAT 71745 ||| | ||| || | |||||||| || || || || ||||||| || | || || Sbjct 105534 AACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGCGCAGTAC 105593 Query 71746 TGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 71805 | || || || ||||||||||| | |||||| || | || | || || ||| Sbjct 105594 TCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTC 105653 Query 71806 TTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCT 71865 || ||| || |||||| || || ||||| || ||||||| || |||| | || Sbjct 105654 TTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCTCG 105713 Query 71866 ATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTC 71924 | || || | ||||| | || | ||||| || || | || || | || Sbjct 105714 AGGATGGCATACCAGA-GCTTCTGGGCCTTGATCGACTTGCCGCGTCCCTCGGCC---TC 105769 Query 71925 GTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACAT 71982 ||||| ||| | | | |||||||| || || | ||| | | ||||| || Sbjct 105770 GTATTTCTCGTACAGAGCC--TCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCAC 105827 Query 71983 TCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCA 72042 ||||| || ||||| || | ||| || || | | ||||| ||||| ||||||||| Sbjct 105828 TCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCA 105887 Query 72043 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT 72102 |||||||||||||| | || ||||| | | | ||||| || || ||||| Sbjct 105888 GGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTA 105947 Query 72103 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 72162 ||||| || ||| | | | ||| | ||||| || || | ||| || || | | Sbjct 105948 CGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCA 106007 Query 72163 CCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 72222 || || || ||||| || |||||||| | |||||| || ||||| || | || | || | Sbjct 106008 CCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGC 106067 Query 72223 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 72282 || || | ||| || || |||| || || || || | || || ||| | |||||| Sbjct 106068 ATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGA 106127 Query 72283 ATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 72340 || || ||||| | || || || |||||||| || ||||| | || || | Sbjct 106128 ATGCGATGAACATTGA--GGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCT 106185 Query 72341 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 72400 | | || |||||||| ||||| || || || ||| |||||| | ||||| ||| || Sbjct 106186 TCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAG 106245 Query 72401 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 72460 ||| |||| || ||| || ||||| || | || ||||| || || || || | | Sbjct 106246 ACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACT 106305 Query 72461 TTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCC 72518 | ||||| || ||||||||||| || | ||| | || ||| | || || Sbjct 106306 TGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATACC 106363 Query 72519 TACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 72578 || || |||||||| | ||||||||| || | ||| | || ||| || | |||| Sbjct 106364 AACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAG 106423 Query 72579 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 72636 | ||| ||| |||| || || || ||||| || | ||| ||||| ||||| || Sbjct 106424 GAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCGATCA 106481 Query 72637 TAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 72696 || | ||| | || | |||| ||||| | || | || | ||| || | || Sbjct 106482 TAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGAC-CGAGTCAT-ATGTTTGTT 106539 Query 72697 --GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 72754 || || || || || | || || || || || ||||||| | ||| ||| | Sbjct 106540 GGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGATCGCTTA 106599 Query 72755 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 72814 ||| | || | || ||||||| |||||| || || |||||||| || | ||| | Sbjct 106600 CGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGCGGGCCG 106659 Query 72815 CTAGAATGGCATAATCTGGATG 72836 | ||||||||||| ||||| || Sbjct 106660 CAAGAATGGCATAGTCTGGGTG 106681 >seq12 Length=3698523 Score = 102 bits (112), Expect = 1e-16 Identities = 156/220 (71%), Gaps = 7/220 (3%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || || |||||| ||||||||| || || | | ||| | ||||||||| Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || | |||||||| || || ||||| || | ||| || ||||| || || | ||| Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 ||||||||||| || || || || |||||||| || | || | || | | | Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGC-GAAGGTGGAGT- 322349 Query 42236 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTT 42270 || ||| |||||||| ||||||| ||||||||||| Sbjct 322348 TCTTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138889598120