Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 9e-25
seq12 114 2e-20
>seq17
Length=408792
Score = 129 bits (142), Expect = 9e-25
Identities = 328/494 (66%), Gaps = 5/494 (1%)
Strand=Plus/Minus
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
||||||| ||||| ||||| || || || || || | || ||||| | || || |
Sbjct 106041 GATACGTCGATCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAGCCAT 105982
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
|||||||||| || || || ||| | || | || || ||| ||| || || | |
Sbjct 105981 GGCACGCGGATGTCTTCGAGTTTCTTGATCTCCGTAAGAACCACGGCAAGGAGGAAGTCC 105922
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044
| || | || | || || || ||| | || ||| | ||||||||||| ||| |
Sbjct 105921 GTGCTCGCGATCTTTTCCTCGCTCTTTGGATTCCTGATCTCTTCATGAAGCGAGTCGAGA 105862
Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104
||| |||||| ||||||||||| | || || |||||| | ||| || |
Sbjct 105861 GAAACGGCGACTGGACTTTAATGTGCCCCAATGAGTGCCCTGGTCTGGCTGATGTCTACG 105802
Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAG 97164
|||| ||||| ||||| |||| | |||||| ||||| || | || |||
Sbjct 105801 GCGATGAGTTCGAGGCTCTGTACGAGAAATACGAGGCCGAGGGACGCGGCA--AGTCGA- 105745
Query 97165 TCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223
|| | || | |||| || ||| | |||||| | ||| ||| |||||||| | ||
Sbjct 105744 TCAAGGCCC-AGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACTGGTAACCCT 105686
Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283
| || |||||||||||| | || ||||| |||||||| || | |||||||||
Sbjct 105685 TTTATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATC 105626
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
|||||||||| ||||| || || | |||||| | |||| || ||| || ||
Sbjct 105625 CGCAGCTCCAATCTTTGCACAGAGATCATCGAGTACTGCGCTCCTGATGAGGTTGCTGTG 105566
Query 97344 TGCGTTCTGGCATC 97357
||| ||||||||
Sbjct 105565 TGCAACCTGGCATC 105552
>seq12
Length=3698523
Score = 114 bits (126), Expect = 2e-20
Identities = 202/289 (70%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | || |||
Sbjct 321903 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 321962
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||| || |||| ||| | || | || | |||| |||| || || ||
Sbjct 321963 TCCAAGGACATGCACGACTGGAACAACAAGATT-AATGAAGATGAGAAGTTCTTCATCTC 322021
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||||| | || |||||||||| || ||||| || |||||||| || ||| | ||
Sbjct 322022 CCACATTCTTGCTTTCTTTGCCGCGTCAGATGGCATTGTCAACGAGAACCTGGTCGAGCG 322081
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
||| || | || || || | ||| ||||| ||||| ||||| |||||||
Sbjct 322082 CTTCAGCGGCGAAGTCCAGATCCCCGAAG-CTCGATGCTTCTACGGCTTCCAGATCATGA 322140
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
| |||||| | ||||| || | ||||| || ||||||| |||||
Sbjct 322141 TGGAGAACATTCACTCCGAGACCTACTCGTTGCTCATTGACACCTACAT 322189
Score = 109 bits (120), Expect = 8e-19
Identities = 337/509 (66%), Gaps = 33/509 (6%)
Strand=Plus/Plus
Query 125359 CTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACG 125418
|||| || || ||||| | |||| | |||||||| ||| | || || | | ||
Sbjct 322301 CTATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAACTCCACCTTCG 322360
Query 125419 CCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGG 125478
|| | | || | || ||||||||||| ||||| |||||||| ||| ||| ||
Sbjct 322361 CCCAGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCAT 322420
Query 125479 CCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTA 125538
| ||||| ||| | ||||||||||| || |||||||| |||| |||||| | |
Sbjct 322421 CTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCA 322480
Query 125539 TATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATC 125595
| ||||| ||||| || || ||| || |||||| ||||||| || || || | |
Sbjct 322481 TTTCTCGCGACGAAGGTCTGCACACCGATTTTGCCTGCTTACTGTTCTCCCATCTGAAGC 322540
Query 125596 TGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAA---CCGATGCCG 125652
||||| | ||| || ||| |||||| | ||| | ||| || |
Sbjct 322541 ACCGTCCTG---GCA-----AG-GAT------GTCATCGAGGCTGTCATCGTCGACGCTG 322585
Query 125653 TGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAAC 125711
| | ||| |||||||| || | |||||| || | || | || | |||||||||||
Sbjct 322586 TCAAGATCGAACAAGAATTCTTGACCGAAGCCTTGCC-TTGTGCTCTTCTTGGCATGAAC 322644
Query 125712 TGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT 125771
| || ||| |||| || |||||||| || || ||||| ||| || ||
Sbjct 322645 GCGGATCTCATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCG---CCCTT 322701
Query 125772 GGC--CG-CAAGATTTAC--AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCAC 125826
||| || |||| | ||| || || || ||||| || |||||| | ||| || |
Sbjct 322702 GGCAACGACAAGGTCTACCGTTCGTCA--AACCCCTTCGACTTCATGGAGAACATCTCGC 322759
Query 125827 TAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
| | || |||||||||||||||||||||
Sbjct 322760 TCGGTGGCAAGACCAACTTTTTCGAGAAG 322788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058857260120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |