Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq37 129 1e-24
>seq37
Length=2347807
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|||||||| || || |||||||| ||||| | ||||| || || || ||||| ||||||
Sbjct 2330460 TCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAA 2330519
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || |||||||| || || || |||||||||||||| | || |||||
Sbjct 2330520 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGACTTCACATTA 2330579
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || | || || ||||| || |||||||| || ||||| || || ||
Sbjct 2330580 TCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACG 2330639
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 2330640 AAAATTTGCAT 2330650
Score = 127 bits (140), Expect = 5e-24
Identities = 144/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427
|||||||||||| || |||||||| || || | || || || ||||| || ||||||||
Sbjct 2330687 TTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAA 2330746
Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487
|| || | ||| ||||| ||||| || || || |||||||| ||||| | || |||||
Sbjct 2330747 GATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATT 2330806
Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | || || | || |||||||| || |||||||| || ||||| || || ||
Sbjct 2330807 ATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGAC 2330866
Query 104548 AAATATCTGCATT 104560
|| || ||||||
Sbjct 2330867 GAAAATTTGCATT 2330879
Score = 127 bits (140), Expect = 5e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || || || | ||| |||||||||||| || |||||
Sbjct 2330877 ATTCCACCGCGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCG 2330936
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || || || ||||| || |||||||| ||||| | ||| || || ||
Sbjct 2330937 GAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGG 2330996
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || ||||| |||||||| | || || || || | |||||| | ||
Sbjct 2330997 GGGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCG 2331056
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || ||||| || || ||||||||
Sbjct 2331057 ACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397854165196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |