Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq23 109 5e-19
seq37 98.7 8e-16
>seq23
Length=3455761
Score = 109 bits (120), Expect = 5e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | || | ||| | ||| || ||||||||||| || |||||||| || |
Sbjct 479355 ACCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 479414
Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
| | || || | ||||| |||||||| ||| || |||| || |||||||| ||| |
Sbjct 479415 GAGAGTG-CGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGG 479473
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | | |||||||||| || || ||||| | | ||||| ||| | ||||||
Sbjct 479474 GGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCA 479533
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGT 48729
||| | || || || || || ||||| || ||||| || |||||||| ||
Sbjct 479534 CCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGGT 479585
>seq37
Length=2347807
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||||||||||||||| || | ||| || ||||||| || ||||| || | |
Sbjct 2331143 CTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 2331202
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| | ||||||||||| || | | ||||||||| || || ||||| |
Sbjct 2331203 GATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 2331262
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712
| || ||||| |||| |||||| ||||| || ||||| || |||||||| ||||||
Sbjct 2331263 GTCG--ATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTC 2331320
Query 48713 ACAAAAATCTGCATC 48727
|| || |||||||||
Sbjct 2331321 ACGAAGATCTGCATC 2331335
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
||||||||||| || || ||||||||||| || | || || || | ||||| || ||
Sbjct 2330904 TGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGA-AAGGGTGCGGCCATCCTCAAGTTG 2330962
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | | |||| |||||||| || || | || ||||| || ||| ||
Sbjct 2330963 CTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGAATCTT 2331022
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
| ||||| | |||||||| | ||||| ||||| || ||||| || || ||
Sbjct 2331023 CGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGT 2331082
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||||||||| || || ||||||||
Sbjct 2331083 GAGAGTTTTAACGAAGATCTGCAT 2331106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251010042037
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |