Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq35 107 3e-19
seq12 100 4e-17
>seq35
Length=2561820
Score = 107 bits (118), Expect = 3e-19
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 16527 TCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTA 16586
|| ||| | || ||||||| |||| |||| ||| ||||| ||||| || || |
Sbjct 1639197 TCACTGCAGTGATCTATGAGGAGACCCGTGGTGTCCTGAAGTCTTTCCTTGAGGGTGTCA 1639256
Query 16587 TCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATA 16646
||| |||||| || ||| || |||||||| ||||| ||||||||||| || | |||
Sbjct 1639257 TCCGTGATGCCGTCACCTACACTGAGCACGCCAAACGCAAGACTGTCACATCTCTTGATG 1639316
Query 16647 TCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703
||||||| || |||| || |||||||| | | || |||||||| ||||| |||
Sbjct 1639317 TCGTCTACGCGCTGAAGCGACAAGGCCGCACTCTGTACGGTTTTGGTGGTTAAACTT 1639373
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| |||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct 1639036 GCCAAGCGCCACCGCAAGATC-CTTCGCGACAACATTCAAGGTATTACCAAGCCCGCAAT 1639094
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 1639095 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 1639135
>seq12
Length=3698523
Score = 100 bits (110), Expect = 4e-17
Identities = 85/102 (83%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| ||||
Sbjct 1308564 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 1308622
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| || ||||| |||||||||||||| || |||||| | ||||
Sbjct 1308623 TTCGACGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATTTCTG 1308664
Score = 93.3 bits (102), Expect = 7e-15
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | ||| ||||||| || ||| |||| ||| |
Sbjct 1308726 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGTCCTTCCTCGAGGGCGTCATCCGTGACG 1308785
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || |||||||| || || | || ||||||| |
Sbjct 1308786 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTTACGTCTCTTGACGTCGTCTACG 1308845
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| ||||| || || || || | |||| ||||| || |||||
Sbjct 1308846 CCTTGAAGCGCCAGGGACGCACCCTTTACGGTTTCGGTGGTTAA 1308889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075166170641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |