Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq35 107 3e-19 seq12 100 4e-17 >seq35 Length=2561820 Score = 107 bits (118), Expect = 3e-19 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 16527 TCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTA 16586 || ||| | || ||||||| |||| |||| ||| ||||| ||||| || || | Sbjct 1639197 TCACTGCAGTGATCTATGAGGAGACCCGTGGTGTCCTGAAGTCTTTCCTTGAGGGTGTCA 1639256 Query 16587 TCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATA 16646 ||| |||||| || ||| || |||||||| ||||| ||||||||||| || | ||| Sbjct 1639257 TCCGTGATGCCGTCACCTACACTGAGCACGCCAAACGCAAGACTGTCACATCTCTTGATG 1639316 Query 16647 TCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 ||||||| || |||| || |||||||| | | || |||||||| ||||| ||| Sbjct 1639317 TCGTCTACGCGCTGAAGCGACAAGGCCGCACTCTGTACGGTTTTGGTGGTTAAACTT 1639373 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| |||| ||||| || ||||| ||||| || |||||||| || || Sbjct 1639036 GCCAAGCGCCACCGCAAGATC-CTTCGCGACAACATTCAAGGTATTACCAAGCCCGCAAT 1639094 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 1639095 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 1639135 >seq12 Length=3698523 Score = 100 bits (110), Expect = 4e-17 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| |||| Sbjct 1308564 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 1308622 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | || ||||| |||||||||||||| || |||||| | |||| Sbjct 1308623 TTCGACGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATTTCTG 1308664 Score = 93.3 bits (102), Expect = 7e-15 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||| | ||| ||||||| || ||| |||| ||| | Sbjct 1308726 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGTCCTTCCTCGAGGGCGTCATCCGTGACG 1308785 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || |||||||| || || | || ||||||| | Sbjct 1308786 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTTACGTCTCTTGACGTCGTCTACG 1308845 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | ||||| || || || || | |||| ||||| || ||||| Sbjct 1308846 CCTTGAAGCGCCAGGGACGCACCCTTTACGGTTTCGGTGGTTAA 1308889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075166170641