Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq17 262 5e-65 seq12 113 6e-20 >seq17 Length=408792 Score = 262 bits (290), Expect = 5e-65 Identities = 1309/2062 (63%), Gaps = 46/2062 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| || || ||||| | || | | || | || |||||||| || || || || Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || || |||| ||| || ||||| || || | ||| | || ||| || Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 ||||| |||| ||| || || || |||||||| || | || || ||||| | | | Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 | ||| | |||| |||||||||| || || || | ||| | || | |||| Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | | ||||||| ||| || || || ||||| | |||||| || | ||| | Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| | | | ||||| || || || || || || || ||| Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | || || | |||| |||||| || || || || || | ||||||| || ||| Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 | || |||| || || ||||| ||||| || |||| ||| || || || | || ||| Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACC- 105118 Query 62472 TATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62529 |||||| |||| | | |||| || | ||||||| ||| || || || || ||| Sbjct 105119 -ATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGT 105177 Query 62530 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62589 || || ||||| || | | || ||| | || || ||| | Sbjct 105178 TCCACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGG 105237 Query 62590 GTCCTTCCTTCTCAGCTAG-TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62648 | || | || | || || |||| | || |||||| | | || | ||| ||| Sbjct 105238 GACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCG 105296 Query 62649 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG-ATAATTTAAGAGAAT 62707 ||||||| ||| || || | | || || | || || || || || || Sbjct 105297 AAGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAG 105356 Query 62708 AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62767 ||| ||||| || | || || ||||||| ||| | ||||| |||| | |||| | | Sbjct 105357 AAA-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTGCTGTT 105415 Query 62768 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT 62827 || || || | ||| || | || | || ||||| || || ||||| | |||| Sbjct 105416 CCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAAC 105475 Query 62828 TACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCCCA---TCTATT--AC 62878 || | ||||| ||| || || |||| ||| | |||| | || | || Sbjct 105476 GACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAAC 105532 Query 62879 AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-T 62937 ||| | ||| || | |||||||| || || || || ||||||| || | | ||| | Sbjct 105533 GAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGC-GCAGT 105591 Query 62938 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTAC 62997 | | || ||||| ||||||||||| | ||| || || | || | || || | Sbjct 105592 ACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 105651 Query 62998 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 63057 |||| ||| || |||||| || || || || || ||||||| || |||| | | Sbjct 105652 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCT 105711 Query 63058 CTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT 63116 | | || || | ||||| | || | ||||| || || ||| | | || Sbjct 105712 CGAGGATGGCATACCAGA-GCTTCTGGGCCTTGATC---GACTTGCCGCGTCCCTCGGCC 105767 Query 63117 TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACAT 63176 |||||| |||| |||||||| || || | |||| ||| ||||| || Sbjct 105768 TCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCAC 105827 Query 63177 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63236 |||| || ||||| || | ||| || |||| || ||||| ||||| ||||||||| Sbjct 105828 TCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCA 105887 Query 63237 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296 |||||||||||||| | || ||||| | | | |||||| || || ||||| Sbjct 105888 GGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTA 105947 Query 63297 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63356 ||||| || ||| | | | ||| | ||||| || || | ||| || || | | Sbjct 105948 CGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCA 106007 Query 63357 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63416 || || || ||||| || |||||||| | |||||| || ||||| || | || | || | Sbjct 106008 CCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGC 106067 Query 63417 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGA 63476 || || | ||| ||||||||| | || || || || | || || ||| | |||||| Sbjct 106068 ATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGA 106127 Query 63477 ATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534 || | | |||| || || || || |||||||| || ||||| | || || | Sbjct 106128 ATGCGATGAACATTG--AGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCT 106185 Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAG 63594 | | ||||||||||||||||| ||||| || || |||||| | ||||| ||| || Sbjct 106186 TCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAG 106245 Query 63595 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 63654 ||| |||| || ||| || ||||| || | || ||||| || || || || | | Sbjct 106246 ACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACT 106305 Query 63655 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCC 63712 | ||| | || ||||||||||| || | || | || ||| | || || Sbjct 106306 TGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATACC 106363 Query 63713 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63772 || || |||||||| | ||| ||||| || | ||| | || ||| ||| | |||| Sbjct 106364 AACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAG 106423 Query 63773 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 63830 | ||| ||| |||| || || || ||||| || | ||| ||||| ||||| || Sbjct 106424 GAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCGATCA 106481 Query 63831 TAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 63890 || | ||| | |||| |||| ||||| | || | || | ||| || | || Sbjct 106482 TAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGAC-CGAGTCAT-ATGTTTGTT 106539 Query 63891 --GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 63948 || || || || || | || || || || || ||||||| | ||| ||| | Sbjct 106540 GGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGATCGCTTA 106599 Query 63949 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 64008 ||| | || | || ||||||| |||||| || || |||||||| || | ||| | Sbjct 106600 CGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGCGGGCCG 106659 Query 64009 CTAGAATGGCATAATCCGGATG 64030 | ||||||||||| || || || Sbjct 106660 CAAGAATGGCATAGTCTGGGTG 106681 >seq12 Length=3698523 Score = 113 bits (124), Expect = 6e-20 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || |||||| ||||||||| ||||| | | ||| || ||||||||| Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || | |||||||| || || ||||| || | ||| || || || ||||| | ||| Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--- 33471 ||||||||||| || || || || |||||||| || | || | | || | Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTC 322347 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 |||| |||||||| ||||||| ||||||||||| Sbjct 322346 TTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946911886920