Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq17 262 5e-65
seq12 113 6e-20
>seq17
Length=408792
Score = 262 bits (290), Expect = 5e-65
Identities = 1309/2062 (63%), Gaps = 46/2062 (2%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||| || || ||||| | || | | || | || |||||||| || || || ||
Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| || |||| ||| || ||||| || || | ||| | || ||| ||
Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
||||| |||| ||| || || || |||||||| || | || || ||||| | | |
Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234
| ||| | |||| |||||||||| || || || | ||| | || | ||||
Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879
Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291
|| | | ||||||| ||| || || || ||||| | |||||| || | ||| |
Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939
Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351
|| | | ||| | | | ||||| || || || || || || || |||
Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999
Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411
| || || | |||| |||||| || || || || || | ||||||| || |||
Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059
Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471
| || |||| || || ||||| ||||| || |||| ||| || || || | || |||
Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACC- 105118
Query 62472 TATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62529
|||||| |||| | | |||| || | ||||||| ||| || || || || |||
Sbjct 105119 -ATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGT 105177
Query 62530 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62589
|| || ||||| || | | || ||| | || || ||| |
Sbjct 105178 TCCACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGG 105237
Query 62590 GTCCTTCCTTCTCAGCTAG-TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62648
| || | || | || || |||| | || |||||| | | || | ||| |||
Sbjct 105238 GACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCG 105296
Query 62649 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG-ATAATTTAAGAGAAT 62707
||||||| ||| || || | | || || | || || || || || ||
Sbjct 105297 AAGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAG 105356
Query 62708 AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62767
||| ||||| || | || || ||||||| ||| | ||||| |||| | |||| | |
Sbjct 105357 AAA-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTGCTGTT 105415
Query 62768 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT 62827
|| || || | ||| || | || | || ||||| || || ||||| | ||||
Sbjct 105416 CCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAAC 105475
Query 62828 TACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCCCA---TCTATT--AC 62878
|| | ||||| ||| || || |||| ||| | |||| | || | ||
Sbjct 105476 GACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAAC 105532
Query 62879 AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-T 62937
||| | ||| || | |||||||| || || || || ||||||| || | | ||| |
Sbjct 105533 GAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGC-GCAGT 105591
Query 62938 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTAC 62997
| | || ||||| ||||||||||| | ||| || || | || | || || |
Sbjct 105592 ACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 105651
Query 62998 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 63057
|||| ||| || |||||| || || || || || ||||||| || |||| | |
Sbjct 105652 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCT 105711
Query 63058 CTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT 63116
| | || || | ||||| | || | ||||| || || ||| | | ||
Sbjct 105712 CGAGGATGGCATACCAGA-GCTTCTGGGCCTTGATC---GACTTGCCGCGTCCCTCGGCC 105767
Query 63117 TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACAT 63176
|||||| |||| |||||||| || || | |||| ||| ||||| ||
Sbjct 105768 TCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCAC 105827
Query 63177 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63236
|||| || ||||| || | ||| || |||| || ||||| ||||| |||||||||
Sbjct 105828 TCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCA 105887
Query 63237 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296
|||||||||||||| | || ||||| | | | |||||| || || |||||
Sbjct 105888 GGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTA 105947
Query 63297 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63356
||||| || ||| | | | ||| | ||||| || || | ||| || || | |
Sbjct 105948 CGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCA 106007
Query 63357 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63416
|| || || ||||| || |||||||| | |||||| || ||||| || | || | || |
Sbjct 106008 CCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGC 106067
Query 63417 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGA 63476
|| || | ||| ||||||||| | || || || || | || || ||| | ||||||
Sbjct 106068 ATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGA 106127
Query 63477 ATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534
|| | | |||| || || || || |||||||| || ||||| | || || |
Sbjct 106128 ATGCGATGAACATTG--AGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCT 106185
Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAG 63594
| | ||||||||||||||||| ||||| || || |||||| | ||||| ||| ||
Sbjct 106186 TCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAG 106245
Query 63595 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 63654
||| |||| || ||| || ||||| || | || ||||| || || || || | |
Sbjct 106246 ACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACT 106305
Query 63655 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCC 63712
| ||| | || ||||||||||| || | || | || ||| | || ||
Sbjct 106306 TGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATACC 106363
Query 63713 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63772
|| || |||||||| | ||| ||||| || | ||| | || ||| ||| | ||||
Sbjct 106364 AACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAG 106423
Query 63773 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 63830
| ||| ||| |||| || || || ||||| || | ||| ||||| ||||| ||
Sbjct 106424 GAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCGATCA 106481
Query 63831 TAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 63890
|| | ||| | |||| |||| ||||| | || | || | ||| || | ||
Sbjct 106482 TAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGAC-CGAGTCAT-ATGTTTGTT 106539
Query 63891 --GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 63948
|| || || || || | || || || || || ||||||| | ||| ||| |
Sbjct 106540 GGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGATCGCTTA 106599
Query 63949 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 64008
||| | || | || ||||||| |||||| || || |||||||| || | ||| |
Sbjct 106600 CGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGCGGGCCG 106659
Query 64009 CTAGAATGGCATAATCCGGATG 64030
| ||||||||||| || || ||
Sbjct 106660 CAAGAATGGCATAGTCTGGGTG 106681
>seq12
Length=3698523
Score = 113 bits (124), Expect = 6e-20
Identities = 156/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || || || |||||| ||||||||| ||||| | | ||| || |||||||||
Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || | |||||||| || || ||||| || | ||| || || || ||||| | |||
Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--- 33471
||||||||||| || || || || |||||||| || | || | | || |
Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTC 322347
Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
|||| |||||||| ||||||| |||||||||||
Sbjct 322346 TTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946911886920
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