Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq31 140 2e-28
seq37 98.7 7e-16
seq23 84.2 1e-11
>seq31
Length=3387
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 901 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 960
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 961 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 995
>seq37
Length=2347807
Score = 98.7 bits (108), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185
|||||||||||| ||||| || |||||| || |||| || | ||| || || |||||
Sbjct 2331143 CTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 2331202
Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245
|| ||||| || ||||||| ||||| ||| || |||||| || || ||| || ||
Sbjct 2331203 GATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 2331262
Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305
| || || || | || || || | || || || || || || | |||||||||
Sbjct 2331263 GTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCAC 2331322
Query 38306 GAATATCTGCAT 38317
||| ||||||||
Sbjct 2331323 GAAGATCTGCAT 2331334
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
||||| || || |||||||| || || || ||||| ||||| | | || |||| ||
Sbjct 2330442 ACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCC 2330501
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
| || ||||||||||| || ||||| || || || | || | ||| || || ||| |
Sbjct 2330502 AGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGA 2330561
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAACTTCTAATGTAATAGTTTT 38287
|| || ||||||||| | || ||| || | || || ||||||| || ||||| ||
Sbjct 2330562 ATCTTCGACTTCACATTATCGATAGTGTC-CGACGACTCGACTTCTAGGGTGATAGTCTT 2330620
Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | ||| || ||||| || |||||
Sbjct 2330621 GCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
>seq23
Length=3455761
Score = 84.2 bits (92), Expect = 1e-11
Identities = 151/219 (69%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|| ||| | ||| || ||||||||||| || || ||||| || || | | || | ||
Sbjct 479370 CAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATC 479429
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | || || ||||| || || | || || || || | ||||| |||||| |||||
Sbjct 479430 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 479489
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCAACTTCTAATGTAATA 38282
| || || ||| ||||| | | || | ||| || || || || | || |||
Sbjct 479490 CTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGAC--TCCACCTCAAGGGTGATA 479547
Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| || ||||| | ||| |||||||| ||||||||| ||
Sbjct 479548 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGGTT 479586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947048959747
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |