Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq17 242 5e-59 seq12 95.1 2e-14 >seq17 Length=408792 Score = 242 bits (268), Expect = 5e-59 Identities = 1306/2063 (63%), Gaps = 48/2063 (2%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||| || || ||||| | || | | || | || |||||||| || || || || Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || || |||| ||| || ||||| || || | ||| | || ||| || Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 ||||| |||| ||| || || || |||||||| || | || || ||||| | | Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 | ||| | |||| |||||||||| || || || | ||| | || | |||| Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 || | | ||||||| ||| || || || ||||| | |||||| || | ||| | Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 || | | ||| | | | ||||| || || || || || || || ||| Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | || || | |||| |||||| || || || || || | ||||||| || ||| Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326 | || |||| || || ||||| ||||| || |||| ||| || || || | || ||| Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACC- 105118 Query 62327 TATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62384 |||||| |||| | | |||| || | ||||||| ||| || || || || ||| Sbjct 105119 -ATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGT 105177 Query 62385 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62444 || || ||||| || | | || ||| | || || ||| | Sbjct 105178 TCCACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGG 105237 Query 62445 GTCCTTCCTTCTCAGCTAG-TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62503 | || | || | || || |||| | || |||||| | | || | ||| ||| Sbjct 105238 GACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCG 105296 Query 62504 AAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGG-ATAATTTAAGAGAAT 62562 ||||||| ||| || || | | || || | || || || || || || Sbjct 105297 AAGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAG 105356 Query 62563 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62622 ||| ||||| || | || || ||||||| ||| | ||||| |||| | |||| | | Sbjct 105357 AAA-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTGCTGTT 105415 Query 62623 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT 62682 || || || | ||| || | || | || ||||| || || ||||| | |||| Sbjct 105416 CCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAAC 105475 Query 62683 TACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCCCA---TCTATT--AC 62733 || | ||||| ||| || || |||| ||| | |||| | || | || Sbjct 105476 GACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAAC 105532 Query 62734 AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-T 62792 ||| | ||| || | |||||||| || || || || ||||||| || | | ||| | Sbjct 105533 GAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGC-GCAGT 105591 Query 62793 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 62852 | | || ||||| ||||||||||| | |||||| || | || | || || | Sbjct 105592 ACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 105651 Query 62853 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 62912 |||| ||| || |||||| || || || || || ||||||| || |||| | | Sbjct 105652 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCT 105711 Query 62913 CTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT 62971 | | || || | ||||| | || | ||||| || || ||| | | | ||| Sbjct 105712 CGAGGATGGCATACCAGA-GCTTCTGGGCCTTGATC---GACTTGC--CGCGTCCCTCGG 105765 Query 62972 --TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGAC 63029 |||||| |||| |||||||| || || | |||| |||| ||||| | Sbjct 105766 CCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGC 105825 Query 63030 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63089 | |||| || ||||| || | ||| || |||| || ||||| ||||| ||||||| Sbjct 105826 ACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGAT 105885 Query 63090 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63149 |||||||||||||||| | || ||||| | | | |||||| || || |||| Sbjct 105886 CAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCT 105945 Query 63150 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63209 | ||||| || ||| | | | ||| | ||||| || || | ||| || || | Sbjct 105946 TACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGG 106005 Query 63210 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63269 | || || || ||||| || |||||||| | |||||| || ||||| || | || | || Sbjct 106006 CACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCA 106065 Query 63270 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCAC 63329 ||| || | ||| || || ||||| || || || || | || || ||| | |||| Sbjct 106066 GCATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCAC 106125 Query 63330 GAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63387 |||| | | |||| || || || || |||||||| || ||||| | || || Sbjct 106126 GAATGCGATGAACATTG--AGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGT 106183 Query 63388 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447 || | || |||||||| ||||| || || || ||| |||||| | ||||| ||| Sbjct 106184 CTTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGA 106243 Query 63448 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA 63507 ||||| |||| || ||| || ||||| || | || ||||| || || || || | Sbjct 106244 AGACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTA 106303 Query 63508 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATT 63565 || ||| | || ||||||||||| || | || | || ||| | || Sbjct 106304 CTTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATA 106361 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 63625 || || || |||||||| | ||| ||||| || | ||| | || ||| ||| | ||| Sbjct 106362 CCAACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTC 106421 Query 63626 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63683 | | ||| ||| |||| || || || ||||| || | ||| ||||| ||||| | Sbjct 106422 AGGAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCGAT 106479 Query 63684 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAATA 63742 | || | ||| | |||| |||| ||||| | || | || || ||| | | Sbjct 106480 CATAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGACCGAGTCATATGTTTGT- 106538 Query 63743 CTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCC 63802 || || ||||| | | || || || || |||||||||| | ||| ||| Sbjct 106539 TGGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGATCGCTT 106598 Query 63803 ATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCG 63862 | ||| | || | || ||||||| ||||| || || |||||||| || | || Sbjct 106599 ACGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGCGGGCC 106658 Query 63863 GCTAGAATGGCATAATCCGGATG 63885 || ||||||||||| || || || Sbjct 106659 GCAAGAATGGCATAGTCTGGGTG 106681 >seq12 Length=3698523 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || || |||||| ||| ||||| ||||| | | ||| | ||||||||| Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || | |||||||| || || ||||| || | ||| || || || || || | ||| Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--- 32828 ||||| ||||| || || || || |||||||| || | || | | || | Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTC 322347 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 |||| |||||||| ||||||| ||||||||||| Sbjct 322346 TTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631706945200