Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq37 102 7e-17
>seq37
Length=2347807
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | ||||| || | ||||| | ||||| ||||||||
Sbjct 2330650 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCG 2330591
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| | || | ||| || || || || ||||| ||||||||
Sbjct 2330590 GACACTATCGATAATGTGAAGTCGAAGATTCAG-GATAAGGAGGGCATTCCTCCTGACCA 2330532
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | ||||||||||| || || | || || | |||||| | || |||||
Sbjct 2330531 GCAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACTCTCTCTGACTACAA 2330472
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| ||| || || || || ||
Sbjct 2330471 CATCCAGAAAGAGAGCACCCTGCACTTGGTTCT 2330439
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || ||||| | ||||| || | ||||| | || || ||||||||
Sbjct 2330879 AATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTC 2330820
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| || ||| || || || || ||||| || || ||
Sbjct 2330819 GGACACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCA 2330760
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| |||| ||||| ||||| ||| | || |||| ||||| | || |||||
Sbjct 2330759 GCAGCGCCTTATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCTGACTACAA 2330700
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| |||||| ||| || ||
Sbjct 2330699 CATTCAGAAAGAAAGCACCCTTCA 2330676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327804596155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |