Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq37 122 7e-23 seq34 98.7 8e-16 >seq37 Length=2347807 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||||||| | || || || || | || || || || || || | Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || |||||||| ||||||||||| || || || || Sbjct 2331046 GATACCATTGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCAG 2330987 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| || | |||||| ||||||| | ||||| |||||| Sbjct 2330986 CAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAAC 2330927 Query 22399 ATTCAAAAAGAA 22410 ||||| |||||| Sbjct 2330926 ATTCAGAAAGAA 2330915 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| || || || ||||| | ||||| || || ||||||| || || || Sbjct 2331339 TAGAGATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGT 2331280 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | |||| ||| | ||| | |||| || || || ||||||||||| || || |||| Sbjct 2331279 CTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCG 2331220 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 |||| || || ||||| ||||| ||||| || | ||||| |||||| | || || | Sbjct 2331219 ATCAGCAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACT 2331160 Query 22394 ACAACATTCAAAAAGAATCCACC 22416 ||||||||||||| || || ||| Sbjct 2331159 ACAACATTCAAAAGGAGTCGACC 2331137 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||||||||| || || || | ||||| || || |||| || ||||| || | | Sbjct 2330651 GATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTC 2330592 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || || ||||| || |||||||| ||||| || || || Sbjct 2330591 GGACACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCA 2330532 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || || || |||||||| || ||| | ||||| |||||| |||| || ||||| Sbjct 2330531 GCAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACTCTCTCTGACTACAA 2330472 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||| || ||||| |||| | || || ||| | ||| |||| ||||| Sbjct 2330471 CATCCAGAAAGAGAGCACCCTGCACTTGGTTCTCCGACTGCGTGGAGG 2330424 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || || |||| || || || || | | Sbjct 2330878 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTCG 2330819 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || || |||||||| ||||| || ||||| Sbjct 2330818 GACACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCAG 2330759 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| ||||| || | |||||| ||||||| | || || |||||| Sbjct 2330758 CAGCGCCTTATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCTGACTACAAC 2330699 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| |||||| |||| Sbjct 2330698 ATTCAGAAAGAAAGCACC 2330681 >seq34 Length=2752027 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| | |||||||| | ||| || |||| Sbjct 472429 ACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCCGATACCATCGACAATGTCAAGTCC 472488 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || || || || || ||||| Sbjct 472489 AAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTGATCTTCGCTGGCAAG 472548 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | |||||| ||| || | ||||| ||||||||||| || Sbjct 472549 CAGCTTGAGGATGGCCGTACTCTTTCCGACTACAACATTCAGAA 472592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727810728905