Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq12 111 3e-19 seq21 84.2 4e-11 >seq12 Length=3698523 Score = 111 bits (122), Expect = 3e-19 Identities = 248/368 (67%), Gaps = 12/368 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || || | |||||| | || ||||| ||||||||||||||||||||||| Sbjct 322784 TCGAAAAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTTGAC 322725 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | | ||| |||| | |||||| || || | || ||||| || |||||||| | | Sbjct 322724 GAACGGTAGACCTTGTCGTTGCCAAGGGCGACCAGGAGACGGTCGGCAACAAACTCGATA 322665 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || || | ||||||||||| | | |||||| | || || | | Sbjct 322664 TACTGCTTCATGAGATCCGCGTTCATGCCAAGAAGAGCACAAGGCAAGGCTTCGGTCAAG 322605 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT-----TCACCTGTGCCAGAG 251797 ||||| | |||| | || || || | | | |||| || | |||||| | Sbjct 322604 AATTCTTGTTCGATCTTGACAGCGTCGACGATGACAGCCTCGATGACATCCTTGCCAG-G 322546 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 || || || ||| | ||| |||| ||| || ||| | | ||||||||| ||| Sbjct 322545 AC----GGTGCTTCAGATGGGAGAACAGTAAGCAGGCAAAATCGGT-GTGCAGACCTTCG 322491 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 |||||| |||| ||||||||| | || ||| ||||| | || || ||| | | | Sbjct 322490 TCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAAC 322431 Query 251917 CAGAAGAT 251924 |||||||| Sbjct 322430 CAGAAGAT 322423 Score = 100 bits (110), Expect = 6e-16 Identities = 158/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||||||||| || ||||| ||||| ||||| || |||| ||||| || || || Sbjct 3245616 AGGTGAGGATCTCTGCAACTGTACATTCTCCCTCGCCTACGGTGCCAAGATCCTTCTCAA 3245675 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | || | | |||||||| |||||| |||||| ||||||||| ||| | Sbjct 3245676 CCAAACTCATCTGCGCCTAAAGCGTGGACGCCGGTACGGTCTCTGCGGTCCCAACGGATC 3245735 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || ||| |||||||||||| |||| || | || | ||||| ||||| || || Sbjct 3245736 CGGCAAGTCTACTCTAATGCGCTCCATCAACAATGAGCAAGTTGAAGGTTTTCCCAA-GC 3245794 Query 279524 A-TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 | || || | ||| || | || ||||||||| | |||||| Sbjct 3245795 AGAGCGAAGTCAAGACTGTCTTCGTTGAGCACGACCTGGACTCC 3245838 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| || ||||||| ||||||| || || ||||| ||||| | Sbjct 3246989 CCAACTTCGGTCTTGATGCCGAGTTGGTGTCTCACTCGCGTATGAAGGGTCTGTCTGGCG 3247048 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTC 280791 | ||| ||||| ||||| | | || | |||||||| |||||| ||||||||| Sbjct 3247049 GTCAGCGTGTCAAGGTTGTCTTGGCTGCTTGTTCGTGGCAACGACCTCACTTGATCGTTC 3247108 Query 280792 TCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 | |||||||| ||||||||||| ||| | || ||||| || ||| Sbjct 3247109 TTGACGAGCCCACCAACTATCTCGACAGAGACTCTCTGGGGGCCCTG 3247155 >seq21 Length=275230 Score = 84.2 bits (92), Expect = 4e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232 |||||||| ||||| ||||| || ||||| || || |||||| |||||||||||||| | Sbjct 133837 GTCATTGGTCCCAACGGTGCTGGCAAGTCAACTCTGATCAAAATCCTGACTGGCGAGGTC 133778 Query 280233 CAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | || | ||| || ||||||||| ||| |||| || | ||| || ||| Sbjct 133777 GTCCCAACCGCGGGCAGAGTCGAGAAGCATCCGAACTTGCGTATTGGGTACATCAAGCAG 133718 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 || ||| | | ||| | || | || || || | ||| || || || ||| | || ||| Sbjct 133717 CATGCTCTGGAGCACGTTGAAATGCATCTTGAGAAGACCCCCAATCAGTACCTACAATGG 133658 Query 280353 CGCTATGCAAGTGGGCAGGATCTGGA 280378 || || || | || | |||| ||| Sbjct 133657 CGTTACGCCAACGGTGACGATCGGGA 133632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836312741117