Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 3e-19
seq21 84.2 4e-11
>seq12
Length=3698523
Score = 111 bits (122), Expect = 3e-19
Identities = 248/368 (67%), Gaps = 12/368 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
||||| || || | |||||| | || ||||| |||||||||||||||||||||||
Sbjct 322784 TCGAAAAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTTGAC 322725
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| | ||| |||| | |||||| || || | || ||||| || |||||||| | |
Sbjct 322724 GAACGGTAGACCTTGTCGTTGCCAAGGGCGACCAGGAGACGGTCGGCAACAAACTCGATA 322665
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || || | ||||||||||| | | |||||| | || || | |
Sbjct 322664 TACTGCTTCATGAGATCCGCGTTCATGCCAAGAAGAGCACAAGGCAAGGCTTCGGTCAAG 322605
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT-----TCACCTGTGCCAGAG 251797
||||| | |||| | || || || | | | |||| || | |||||| |
Sbjct 322604 AATTCTTGTTCGATCTTGACAGCGTCGACGATGACAGCCTCGATGACATCCTTGCCAG-G 322546
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCTCG 251856
|| || || ||| | ||| |||| ||| || ||| | | ||||||||| |||
Sbjct 322545 AC----GGTGCTTCAGATGGGAGAACAGTAAGCAGGCAAAATCGGT-GTGCAGACCTTCG 322491
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|||||| |||| ||||||||| | || ||| ||||| | || || ||| | | |
Sbjct 322490 TCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAAC 322431
Query 251917 CAGAAGAT 251924
||||||||
Sbjct 322430 CAGAAGAT 322423
Score = 100 bits (110), Expect = 6e-16
Identities = 158/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403
|||||||||||| || ||||| ||||| ||||| || |||| ||||| || || ||
Sbjct 3245616 AGGTGAGGATCTCTGCAACTGTACATTCTCCCTCGCCTACGGTGCCAAGATCCTTCTCAA 3245675
Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
| || | || | | |||||||| |||||| |||||| ||||||||| ||| |
Sbjct 3245676 CCAAACTCATCTGCGCCTAAAGCGTGGACGCCGGTACGGTCTCTGCGGTCCCAACGGATC 3245735
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|| ||| |||||||||||| |||| || | || | ||||| ||||| || ||
Sbjct 3245736 CGGCAAGTCTACTCTAATGCGCTCCATCAACAATGAGCAAGTTGAAGGTTTTCCCAA-GC 3245794
Query 279524 A-TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
| || || | ||| || | || ||||||||| | ||||||
Sbjct 3245795 AGAGCGAAGTCAAGACTGTCTTCGTTGAGCACGACCTGGACTCC 3245838
Score = 86.0 bits (94), Expect = 1e-11
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| || ||||||| ||||||| || || ||||| ||||| |
Sbjct 3246989 CCAACTTCGGTCTTGATGCCGAGTTGGTGTCTCACTCGCGTATGAAGGGTCTGTCTGGCG 3247048
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTC 280791
| ||| ||||| ||||| | | || | |||||||| |||||| |||||||||
Sbjct 3247049 GTCAGCGTGTCAAGGTTGTCTTGGCTGCTTGTTCGTGGCAACGACCTCACTTGATCGTTC 3247108
Query 280792 TCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
| |||||||| ||||||||||| ||| | || ||||| || |||
Sbjct 3247109 TTGACGAGCCCACCAACTATCTCGACAGAGACTCTCTGGGGGCCCTG 3247155
>seq21
Length=275230
Score = 84.2 bits (92), Expect = 4e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232
|||||||| ||||| ||||| || ||||| || || |||||| |||||||||||||| |
Sbjct 133837 GTCATTGGTCCCAACGGTGCTGGCAAGTCAACTCTGATCAAAATCCTGACTGGCGAGGTC 133778
Query 280233 CAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
| || | ||| || ||||||||| ||| |||| || | ||| || |||
Sbjct 133777 GTCCCAACCGCGGGCAGAGTCGAGAAGCATCCGAACTTGCGTATTGGGTACATCAAGCAG 133718
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
|| ||| | | ||| | || | || || || | ||| || || || ||| | || |||
Sbjct 133717 CATGCTCTGGAGCACGTTGAAATGCATCTTGAGAAGACCCCCAATCAGTACCTACAATGG 133658
Query 280353 CGCTATGCAAGTGGGCAGGATCTGGA 280378
|| || || | || | |||| |||
Sbjct 133657 CGTTACGCCAACGGTGACGATCGGGA 133632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836312741117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |