Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq37 158 2e-33
seq23 156 8e-33
seq12 96.9 6e-15
>seq37
Length=2347807
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || || | |||||||| || ||| |||||| |||||||| || || |||
Sbjct 2330424 CCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAG 2330483
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || ||||| | || ||||| || |||
Sbjct 2330484 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGA 2330543
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || |||||||| | ||| || ||||| ||||| | || || |||
Sbjct 2330544 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACT 2330603
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || || |||||||||||||| || |||||
Sbjct 2330604 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
Score = 132 bits (146), Expect = 9e-26
Identities = 173/239 (72%), Gaps = 3/239 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || || ||||| ||||| ||||| || || ||
Sbjct 2331108 CCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 2331167
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || | ||||| || || || || || | || || ||||| ||
Sbjct 2331168 AAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGG 2331227
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 2331228 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACC 2331287
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT---TATGCTATT 68470
|| | |||||||| || || |||||||| || ||||| |||||||| |||| ||||
Sbjct 2331288 TCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGGTATT 2331346
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | || | ||| || ||| ||||| || ||||| || ||||
Sbjct 2330878 TTCCACCGCGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGG 2330937
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | ||||| || | ||||| || || || || || | || ||||| || |
Sbjct 2330938 AAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGG 2330997
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || || ||||| ||||||||||| | ||||||| || ||||| || | || || |
Sbjct 2330998 GGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGA 2331057
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||| ||||| || || ||||| || || ||||| ||||||||
Sbjct 2331058 CCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | ||| || ||| ||||| || ||||| || || ||
Sbjct 2330652 CCACCGCGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAA 2330711
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || || || || || | || || || || |||
Sbjct 2330712 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGA 2330771
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || || ||||| | ||| || ||||| ||||| | || || ||
Sbjct 2330772 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACC 2330831
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | |||||| || || || || |||||||||||||| || ||||||
Sbjct 2330832 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879
>seq23
Length=3455761
Score = 156 bits (172), Expect = 8e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || | || || | || || ||| ||| || |||||||| || ||||||
Sbjct 479356 CCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 479415
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | || || ||||| || ||
Sbjct 479416 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGG 479475
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| || ||||| | |||||| || |||||||| ||| || || ||
Sbjct 479476 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTC-GCTCGACTCCAC 479534
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||| ||||| ||||||||
Sbjct 479535 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582
>seq12
Length=3698523
Score = 96.9 bits (106), Expect = 6e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | ||| || | |||| |||||| || || || ||||||
Sbjct 3246626 CGCCACTGGATGTACTCGGAGGGAGTAAGCTCCAAGTGGTTATCGATGTGCGCGAAAGCG 3246567
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099
||||| | ||| || || || ||||| |||| | | ||| | || ||
Sbjct 3246566 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATTTCACCCTGGGTAGGG 3246507
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| |||||||| || ||||| || |||| |||||| ||||| |||||||||||
Sbjct 3246506 ATGAG-CTCACCGGTGAGCACGTTGATCAGGGTAGACTTGCCGGCACCGTTGGGGCCAAT 3246448
Query 225160 CACGCCAATCCGGGA 225174
||| |||| |||||
Sbjct 3246447 GACGGCAATACGGGA 3246433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621973749640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |