Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq37 158 2e-33 seq23 156 8e-33 seq12 96.9 6e-15 >seq37 Length=2347807 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | |||||||| || ||| |||||| |||||||| || || ||| Sbjct 2330424 CCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAG 2330483 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || ||||| | || ||||| || ||| Sbjct 2330484 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGA 2330543 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| | ||| || ||||| ||||| | || || ||| Sbjct 2330544 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACT 2330603 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || |||||||||||||| || ||||| Sbjct 2330604 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Score = 132 bits (146), Expect = 9e-26 Identities = 173/239 (72%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| ||||| ||||| || || || Sbjct 2331108 CCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 2331167 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | ||||| || || || || || | || || ||||| || Sbjct 2331168 AAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGG 2331227 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 2331228 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACC 2331287 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT---TATGCTATT 68470 || | |||||||| || || |||||||| || ||||| |||||||| |||| |||| Sbjct 2331288 TCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGGTATT 2331346 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| ||||| || || | || | ||| || ||| ||||| || ||||| || |||| Sbjct 2330878 TTCCACCGCGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGG 2330937 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||| || | ||||| || || || || || | || ||||| || | Sbjct 2330938 AAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGG 2330997 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || ||||| ||||||||||| | ||||||| || ||||| || | || || | Sbjct 2330998 GGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGA 2331057 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||| ||||| || || ||||| || || ||||| |||||||| Sbjct 2331058 CCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| || ||| ||||| || ||||| || || || Sbjct 2330652 CCACCGCGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAA 2330711 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| || || || || || | || || || || ||| Sbjct 2330712 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGA 2330771 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || || ||||| | ||| || ||||| ||||| | || || || Sbjct 2330772 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACC 2330831 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||| || || || || |||||||||||||| || |||||| Sbjct 2330832 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879 >seq23 Length=3455761 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || | || || | || || ||| ||| || |||||||| || |||||| Sbjct 479356 CCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 479415 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | || || ||||| || || Sbjct 479416 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGG 479475 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 |||||||||||||| || ||||| | |||||| || |||||||| ||| || || || Sbjct 479476 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTC-GCTCGACTCCAC 479534 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||| ||||| |||||||| Sbjct 479535 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 >seq12 Length=3698523 Score = 96.9 bits (106), Expect = 6e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||| || | |||| |||||| || || || |||||| Sbjct 3246626 CGCCACTGGATGTACTCGGAGGGAGTAAGCTCCAAGTGGTTATCGATGTGCGCGAAAGCG 3246567 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099 ||||| | ||| || || || ||||| |||| | | ||| | || || Sbjct 3246566 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATTTCACCCTGGGTAGGG 3246507 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| |||||||| || ||||| || |||| |||||| ||||| ||||||||||| Sbjct 3246506 ATGAG-CTCACCGGTGAGCACGTTGATCAGGGTAGACTTGCCGGCACCGTTGGGGCCAAT 3246448 Query 225160 CACGCCAATCCGGGA 225174 ||| |||| ||||| Sbjct 3246447 GACGGCAATACGGGA 3246433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621973749640