Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq17 372 6e-98 seq12 201 2e-46 >seq17 Length=408792 Score = 372 bits (412), Expect = 6e-98 Identities = 1152/1754 (66%), Gaps = 80/1754 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| || || | || |||| ||| ||||||||||||||||| ||||| Sbjct 104637 ACGGTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTC 104696 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 |||||| |||| || || ||||||| || | ||| ||| || ||| Sbjct 104697 AGTCCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG------GGG 104750 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 || | | | || ||| || |||||| |||||| | ||||| |||| || || Sbjct 104751 TCTTTCATGTG------GATGTTCAGAGACTGGGACTGGTCAATGAAGG-CGCCACGATC 104803 Query 243916 TGCGGCCATGGTGATGA-GGTCCT-TCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 |||||||| | || |||||| | |||||| || || ||| |||||||| | || | Sbjct 104804 GGCGGCCATCTGAACGACGGTCCTCTGTGAGATTTCCCAAACG--GTCTTGTACAGGGCC 104861 Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 |||| | |||| | ||||||||| || || || || | | | || | | Sbjct 104862 TTGACTTCGGCGGGAATATTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGA 104921 Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG--- 244090 | |||||| || ||| || |||| | |||| ||| || || ||| | Sbjct 104922 TTCTTCATGTTGTCAGACCAGAGACCCATGTCGACCAGGTCCTTGA---GGAGCCAGGGG 104978 Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150 || || ||||| || || || | ||| || || || ||| | |||| || ||| Sbjct 104979 TTGACAACCTGGAAATCGCCAGCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGC 105038 Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210 |||| || ||| |||||||||| ||||| | ||| ||||| |||||||||| || | Sbjct 105039 TCGAAGCACTCATTGTTGCCCAGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATC 105098 Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGT--CCC 244268 | || ||||| | | || || || ||| ||||||| | |||| | | Sbjct 105099 AACAAGCTGTTGCGAATACCATGTTCCTTGAT-------CTGAGCT---TTCAGTGACTC 105148 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 || ||| ||||||| | | | | |||||||||| |||| || | |||||| Sbjct 105149 CCAATCCC-AGAGGTCAGATGGAGTAACGTTCCACATGTCATACTGGAGGATACCCTTGG 105207 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG-GGCCAGCTT-ACAGCT 244386 ||| || ||| |||||||| | ||||||||| | || || ||| || || | | Sbjct 105208 AGACAGGAGAGCCTTCGTAGGTGGAGTAGGGACCCT-GCTCTTTGGCGAGGTTCATGGAG 105266 Query 244387 CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT- 244445 |||| | | | || | ||||| ||||||||||||| |||||||| | | ||||| Sbjct 105267 GCCGTCAATG-CAGCATGGTAGAGGGTCTCGAAGATCTGCTTGTTCAGCTGTCTGGCCTC 105325 Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505 || | | |||||| |||| | || ||| |||| || || ||||| || || | Sbjct 105326 TGGTG-ACTCGAAGGGCATGCGGAGAGCCAAGAAAGCGTCAGCAAGACCCTGGACACCAA 105384 Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565 || | |||| ||||||| | ||| | | || || || || ||||| |||| Sbjct 105385 GACCAACAGGTCGGTGTCGCATATTGCTGTTCCGTGCCTCAGGTACAGGGTAGTGGTTGA 105444 Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625 ||||||| | |||||| || ||||| | | | ||| || ||| ||||| Sbjct 105445 CGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCTCATGAAGCTTCTGAA 105504 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGA-TGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 |||| ||| | || ||| | || ||| || ||| |||||| | | Sbjct 105505 AGTCATACGTG-------CC----CGAGTTGTAATCA--ACGAAC-----GAGGGCAAAG 105546 Query 244685 C--TGG---CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGG 244739 | ||| |||||||||| || || ||||| || | | ||||| || ||||| | Sbjct 105547 CCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTG 105606 Query 244740 TGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGG 244799 |||| || || || ||||||||| |||| || || ||| |||| ||||||| Sbjct 105607 TGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 105666 Query 244800 CGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCC 244859 |||||||||||||| || || || |||||| ||| || |||||| | | || Sbjct 105667 GATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACC 105726 Query 244860 AGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACA 244919 |||| | | ||||||| || | ||| || | ||||| |||||||| ||||| Sbjct 105727 AGAGCTTCTGGGCCTTGATCGACTTGC-CGCGT--CCCTCGGCCTCGTATTTCTCGTACA 105783 Query 244920 GGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGA 244979 | ||||||||||| ||| |||| || | || || |||||| |||||||| | Sbjct 105784 GAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTA 105843 Query 244980 GACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCT 245039 | |||| |||||| || ||| | || ||||||||| || || ||||| || || Sbjct 105844 AAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGA 105903 Query 245040 GGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGT 245099 |||| || || | | | || ||| ||| |||||| | || || | ||| | Sbjct 105904 GGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAACT 105963 Query 245100 CAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGC 245159 | ||||| || ||||||| ||||| | ||||| ||||| ||| ||||| |||||||||| Sbjct 105964 CGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGC 106023 Query 245160 CTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCG 245218 | ||||| || || ||| | || | |||||||| ||||| | || || |||||| Sbjct 106024 CACCCTGATCGACGTATCTCGC-AGTGTTGTTGAAGACACGCAGCATGGGGACAATGCCG 106082 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC 245278 || || ||||| ||||| ||||| | || | | | | ||| |||| || Sbjct 106083 TTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCAC---GAATGC-GATGAAC 106138 Query 245279 AT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGC 245334 || ||| | || || || ||| ||||| | ||| ||| |||| | |||||| Sbjct 106139 ATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATA 106198 Query 245335 TATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTT 245394 || ||||| ||||||||| |||||||| || |||||||||||| ||||| |||| || Sbjct 106199 GATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTGGGCCTG 106258 Query 245395 GGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAA 245454 || | | | ||||| || ||||| || || || ||||| ||| || | || Sbjct 106259 AGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAGACATGAG 106318 Query 245455 CCCGTACGTCTGGA 245468 |||||||| || Sbjct 106319 GTTGTACGTCTCGA 106332 >seq12 Length=3698523 Score = 201 bits (222), Expect = 2e-46 Identities = 363/518 (70%), Gaps = 12/518 (2%) Strand=Plus/Plus Query 42633 CCCTGC-ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAA 42690 |||||| ||| |||||||| |||||||| || || ||||||| | | || | | | Sbjct 322296 CCCTGCTATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCGCC-GACAAGAACTCCA 322354 Query 42691 CGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCT 42750 | |||| | || | || | ||||| ||||||| ||||| ||||||||| || || | Sbjct 322355 CCTTCGCCCAGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTT 322414 Query 42751 TCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG-ATGCCCGGACTCACCTTCTCGAAC 42809 |||| || ||||||||| | ||| || | ||| |||||||| | ||||| || ||| Sbjct 322415 TCGCATCTATCTTCTGGTTGAAGAAGCGCG-GTCTTATGCCCGGCTTGACCTTTTCCAAC 322473 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || ||||| | ||||| || ||||| | || ||||||||| | |||||||| | Sbjct 322474 GAGCTCATTTCTCGCGACGAAGGTCTGCACACCGATTTTGCCTGCTTACTGTTCTC---C 322530 Query 42870 CACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 || || | |||| | ||| | ||||| || ||| ||||| || || || | Sbjct 322531 CATCTGAAGCACC-GTCCTGGCAAGGATGTCATCGAGGCTGTCATCGTCGACGCTGTCAA 322589 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCC-CTGGTCGGCATGAACCACG 42987 |||||| | || ||| | || | | |||| ||| | || | ||||||||| | Sbjct 322590 GATCGAACAAGAATTCTTGACCGAAGCCTTGCCT-TGTGCTCTTCTTGGCATGAACGCGG 322648 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047 | |||||| |||| ||| ||| || ||||||| ||||||| | | || | Sbjct 322649 ATCTCATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCAACG 322708 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | ||||| || | |||||||||||| ||||||||||||||| | | |||| Sbjct 322709 ACAAGGTCTACCGTTCGTCAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGTGGCA 322768 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||||||||||||||||||||||||||| ||| Sbjct 322769 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTATCAG 322806 Score = 134 bits (148), Expect = 3e-26 Identities = 233/335 (70%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| |||||||||||||||||| Sbjct 321903 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 321962 Query 42360 GCCAAGGACACGGCCGGCTGGGA-GTCA--CTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 ||||||||| | || |||| | || | ||| | || ||||| ||| || Sbjct 321963 TCCAAGGACATGCACGACTGGAACAACAAGATTAATGAAGATGAGAAGTTCTTCATCTCC 322022 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 |||| || || ||||| ||||| || || ||||| ||||| |||||||||| | | Sbjct 322023 CACATTCTTGCTTTCTTTGCCGCGTCAGATGGCATTGTCAACGAGAACCTGGTCGAGCGC 322082 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| || || ||| | || || || |||||||||||||||||||| || Sbjct 322083 TTCAGCGGCGAAGTCCAGATCCCCGAAGCTCGATGCTTCTACGGCTTCCAGATCATGATG 322142 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | ||||| ||| ||| | |||||| |||| |||||| ||| ||| Sbjct 322143 GAGAACATTCACTCCGAGACCTACTC---GTTGCTCATTGACACCTACATCAAGGAGCCC 322199 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 | | |||| | | || ||||| ||||| || || Sbjct 322200 GCCCAGCGAACCTATCTTTTCAATGCCATTGAAAC 322234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338763243120