Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq37 143 6e-29
seq12 105 2e-17
seq34 86.0 1e-11
>seq37
Length=2347807
Score = 143 bits (158), Expect = 6e-29
Identities = 171/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || || |||| ||||||||||| || || || ||||| |
Sbjct 2330652 CCACCGCGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAA 2330711
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| ||||| || || || | ||| || || || ||||| || ||||| || ||||
Sbjct 2330712 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTG---ATCTGGA 2330768
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||||||||| |||| ||||| || || |||| || ||| ||
Sbjct 2330769 GGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCG 2330828
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||| ||||| ||||| || ||||||||||| || ||||||
Sbjct 2330829 ACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879
Score = 129 bits (142), Expect = 1e-24
Identities = 168/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||||||||| | || || || |||| ||||||||||| || || || |||||||
Sbjct 2330879 TCCACCGCGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGA 2330938
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
|| ||||| || || || | ||| || || || ||||| || ||||| || |||
Sbjct 2330939 AAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTG---GTCTGG 2330995
Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
||||| || || ||||| || || |||| || ||||| || || | ||| || ||
Sbjct 2330996 GGGGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTC 2331055
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || || ||||| || || ||||| || ||||| ||||||||
Sbjct 2331056 GACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
Score = 127 bits (140), Expect = 5e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| || || || |||| || || | || | ||||| ||||| ||||| || |||||
Sbjct 2330421 TGGCCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCA 2330480
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| ||| ||||| ||||| || | || ||||| || || || || ||||| || |
Sbjct 2330481 GAGAGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGA 2330540
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| || |||| ||||| || || |||| || ||| ||
Sbjct 2330541 GGAATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCG 2330600
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||| ||||| ||||| || ||||||||||| || |||||
Sbjct 2330601 ACTTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
Score = 111 bits (122), Expect = 4e-19
Identities = 172/244 (70%), Gaps = 4/244 (2%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | ||| || || || | || || ||||| || || ||||
Sbjct 2331104 CATG-CCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGT 2331162
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | | ||||| ||||| || | ||| || || || ||||| || ||||| |||
Sbjct 2331163 CCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGG 2331222
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| || | || ||||| || || | ||| || |
Sbjct 2331223 GGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACT 2331282
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT---TATGT 288478
| || ||||| ||||| ||||||||||| || || || ||||| |||||||| ||||
Sbjct 2331283 CGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGG 2331342
Query 288479 TATT 288482
||||
Sbjct 2331343 TATT 2331346
>seq12
Length=3698523
Score = 105 bits (116), Expect = 2e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 269112 CGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCT 269171
|||| |||| ||| | || || | || ||| || | | || ||||| || |||||
Sbjct 322593 CGAACAAGAATTCTTGACCGAAGCCTTGCCTTGTGCTCTTCTTGGCATGAACGCGGATCT 322652
Query 269172 CATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAA 269231
|||||| || |||||||| || || || || ||| || | || || || | || ||
Sbjct 322653 CATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCAACGACAA 322712
Query 269232 AGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGAC 269291
|| ||| |||| || ||||||| ||| ||||| || ||||||| || |||||
Sbjct 322713 GGTCTACCGTTCGTCAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGTGGCAAGAC 322772
Query 269292 GAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATGAA 269342
||||| ||||| ||||| ||| ||||||||| ||||||| |||||
Sbjct 322773 CAACTTTTTCGAGAAGCGCGTCGCCGACTATCAGAAGGCTGGTGTTATGAA 322823
>seq34
Length=2752027
Score = 86.0 bits (94), Expect = 1e-11
Identities = 129/182 (71%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || || || ||||||| || || || || || || | || || || |||||||||
Sbjct 472592 TTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 472533
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| ||||| || |||||| || || || || |||||||| || | || || ||
Sbjct 472532 AGGCGCTGCTG---GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 472476
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||| || || || || || ||||| ||||| || ||||| ||||| |||
Sbjct 472475 TCGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 472416
Query 288463 AA 288464
||
Sbjct 472415 AA 472414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653840770086
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |