Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq37 122 9e-23 seq23 91.5 1e-13 >seq37 Length=2347807 Score = 122 bits (134), Expect = 9e-23 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 ||||| || |||||||| || | || ||||| |||| || |||||||| |||||| || Sbjct 2330460 TCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAA 2330519 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||||||||| |||||||| || || || || || || || ||| ||| Sbjct 2330520 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGACTTCACATTA 2330579 Query 64373 TCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | || | ||| || || ||||||| || | ||||||||||| | || || | Sbjct 2330580 TCGATAGTGT--CCGACGACTCGACTTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGA 2330637 Query 64431 CGAAAATTTGCAT 64443 ||||||||||||| Sbjct 2330638 CGAAAATTTGCAT 2330650 Score = 107 bits (118), Expect = 2e-18 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 |||||| ||||||||||| || | | |||||| | || ||||| |||||||| ||| | Sbjct 2330687 TTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAA 2330746 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 || || |||||||| || |||||||| || || || || || || || ||| ||| Sbjct 2330747 GATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATT 2330806 Query 64372 CTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTT 64429 || | || | ||| || || || |||| || | ||||||||||| | || || Sbjct 2330807 ATCGATAGTGT--CCGACGACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTG 2330864 Query 64430 ACGAAAATTTGCATT 64444 ||||||||||||||| Sbjct 2330865 ACGAAAATTTGCATT 2330879 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 |||||| ||||||||||| || | | |||||| | || ||||| |||||||| ||| | Sbjct 2330915 TTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAA 2330974 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 || || ||||||||||| || || || || || || ||||| || || ||| || Sbjct 2330975 GATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGAATCTTCGACTTGACGTT 2331034 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | |||||| || || || || | || | ||||||||| || | |||||| || Sbjct 2331035 GTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAAC 2331094 Query 64432 GAAAATTTGCAT 64443 ||| || ||||| Sbjct 2331095 GAAGATCTGCAT 2331106 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | ||||| || |||||||||||||| || | | ||||| |||| Sbjct 2331122 AAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTC 2331181 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || || |||||||| ||| | || || |||||||| ||||| || || || || || || Sbjct 2331182 CTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTC 2331241 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | || || || | ||| | ||| Sbjct 2331242 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGT 2331301 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| ||||| | ||||| ||||| || ||||| Sbjct 2331302 CTTCCCGGTGAGGGTTTTCACGAAGATCTGCAT 2331334 >seq23 Length=3455761 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| ||||| ||||| | || || || || |||||||| || | Sbjct 479355 ACCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 479414 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || |||||||||||||| |||| | ||||||||||| || || Sbjct 479415 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGG 479474 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| ||| || | || || | | ||||| Sbjct 479475 GATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCAC 479534 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| || ||||| Sbjct 479535 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644568914280