Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 5e-19
seq37 107 2e-18
seq23 96.9 3e-15
>seq12
Length=3698523
Score = 109 bits (120), Expect = 5e-19
Identities = 341/515 (66%), Gaps = 25/515 (5%)
Strand=Plus/Plus
Query 52338 CGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAG 52397
||||| ||||| | ||||| |||||||||||| | | | | |||| | ||| ||
Sbjct 322306 CGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAACTCCACCTTCGCCCAG 322365
Query 52398 CGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTT-GCCGCCAT 52456
|| | | ||||||||| || ||||| | || || || ||||| || | ||
Sbjct 322366 CGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGT-GCTTTCGCATCTAT 322424
Query 52457 CTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATC 52516
||| | | || | | || | ||||||||| |||| || ||||||| | || ||
Sbjct 322425 CTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTC 322484
Query 52517 GCGCGACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACTACAA---GACGCGCGT 52570
||||||||||| |||||||| || ||||| ||| || | || | | || || |
Sbjct 322485 TCGCGACGAAGGTCTGCACACCGATTTTGCCTGCTTACTGTTCTCCCATCTGAAGCACCG 322544
Query 52571 GACCGAAAAATTGGATTCGGACA-CGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCG 52629
| | || |||| | || ||| ||| ||| || || || || ||||
Sbjct 322545 TCCTGGCAA---GGAT---GTCATCGAGGCTGT-CATCGTC---GACGCTGTCAAGATCG 322594
Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689
|| | || || || || | || |||| | || || |||||||||||| | ||
Sbjct 322595 AACAAGAATTCTTGACCGAAGCCTTGCCTTGTGCTCTTCTTGGCATGAACGCGGATCTCA 322654
Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAG 52748
|| |||| ||||||||||| || || ||||| |||| || || | | ||| |
Sbjct 322655 TGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCAACGACAAGG 322714
Query 52749 TACTTCAACGCTCGC--AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGA 52806
| || | || ||| || || || || || ||| | ||||| ||||| | |||||||
Sbjct 322715 T-CTAC--CGTTCGTCAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGTGGCAAGA 322771
Query 52807 CCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841
||||||||||||||||||| |||| ||| ||| ||
Sbjct 322772 CCAACTTTTTCGAGAAGCGCGTCGCCGACTATCAG 322806
>seq37
Length=2347807
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || ||| || |||||||||||| || || | |
Sbjct 2331141 GACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCA 2331200
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| || || || || || || || ||||| ||| || || |
Sbjct 2331201 AAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 2331260
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||| ||||||| || | || || || || || |||||
Sbjct 2331261 TTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTC 2331320
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 2331321 ACGAAGATCTGCAT 2331334
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483
|| || ||||||||||||||| | || || ||||| ||||| || || | | ||
Sbjct 2330916 TCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 2330975
Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TT 138541
||||| ||||| ||||| || || ||||| || || || ||| | || | || | ||
Sbjct 2330976 ATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATC-TTGAATCTTCGACTTGACGTT 2331034
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||| || | ||||| ||||||| || | || || ||||| |||||||| |
Sbjct 2331035 G-TCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAA 2331093
Query 138602 CAAAAATCTGCATG 138615
| || |||||||||
Sbjct 2331094 CGAAGATCTGCATG 2331107
>seq23
Length=3455761
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||| | ||| || |||||||| || || |||| |
Sbjct 479391 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 479450
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
|| | ||||| |||||||| || || ||||| ||||| ||| || || | |||
Sbjct 479451 AATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATT 479510
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||||| ||||||||||||| | || | || || || || || || || |
Sbjct 479511 G-TCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCA 479569
Query 138602 CAAAAATCTGCATGG 138616
| || ||||||||||
Sbjct 479570 CGAAGATCTGCATGG 479584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262170478640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |