Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq37 120 3e-22 seq12 116 4e-21 seq23 96.9 3e-15 seq34 89.7 5e-13 >seq37 Length=2347807 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||| ||||| || || ||||| || || || || || ||| Sbjct 2331138 GTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCA 2331197 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||||||||| || ||||||||||||||| ||| || |||| Sbjct 2331198 GCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 2331257 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | |||||| |||| || | || || ||||| || || Sbjct 2331258 ACGTTG-TCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGT 2331316 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 2331317 TTTCACGAAGATCTGCAT 2331334 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 126923 TCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAG 126982 ||||| ||||| ||||| || | ||||| ||| || || || || ||||| || Sbjct 2330688 TCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 2330747 Query 126983 ATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGT 127042 || | ||||||||||| ||||| ||||||||||| ||| ||| ||| ||| | | Sbjct 2330748 ATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTA 2330807 Query 127043 TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 127102 |||| ||||||| |||||| || | ||| | || |||||||| || || || || Sbjct 2330808 TCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACG 2330867 Query 127103 AAAATCTGCAT 127113 ||||| ||||| Sbjct 2330868 AAAATTTGCAT 2330878 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 |||||| || || ||||| || | ||||| || || ||||| ||||| || | Sbjct 2330459 CTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAA 2330518 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 || | |||||||| || ||||| ||||||||||| ||| || ||| ||| | | Sbjct 2330519 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGACTTCACATT 2330578 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| ||||||||| | ||| | || |||||||| || || || || Sbjct 2330579 ATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGAC 2330638 Query 127102 AAAAATCTGCAT 127113 ||||| ||||| Sbjct 2330639 GAAAATTTGCAT 2330650 >seq12 Length=3698523 Score = 116 bits (128), Expect = 4e-21 Identities = 343/518 (66%), Gaps = 18/518 (3%) Strand=Plus/Plus Query 47070 CCCTGCG-TGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCAC 47128 |||||| | |||| |||||||| ||||| |||||| || | || | ||| ||| Sbjct 322296 CCCTGCTATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAACTCCAC 322355 Query 47129 TCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT 47188 | ||| | ||| | || || |||||| ||| ||||| |||||||| || |||| Sbjct 322356 CTTCGCCCAGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGT-GCTT 322414 Query 47189 T-GCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACG 47247 | || | || || | |||| | || ||||||||||| | || ||| ||||| Sbjct 322415 TCGCATCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACG 322474 Query 47248 AGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTA 47307 |||| || || | |||||||| ||||||||| | |||||||| || ||| || Sbjct 322475 AGCTCATTTCTCGCGACGAAGGTCTGCACACCGATTTTGCCTG-CT----TACTGTTCT- 322528 Query 47308 GAGTCGATCAAAAG-TTGGACGTGCCCA--CCGTCAGCGA-CATGT--TTGCCGAAGCCG 47361 | ||| ||| | | || | | |||| ||| ||| | | ||| || | Sbjct 322529 ---CCCATCTGAAGCACCGTCCTGGCAAGGATGTCATCGAGGCTGTCATCGTCGACGCTG 322585 Query 47362 TCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACG 47421 || || || || || || |||| || |||| || | | || ||||||| Sbjct 322586 TCAAGATCGAACAAGAATTCTTGACCGAAGCCTTGCCTTGTGCTCTTCTTGGCATGAACG 322645 Query 47422 CGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGT 47481 |||| | |||| |||| ||||| ||||| |||||||| || || || || Sbjct 322646 CGGATCTCATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCA 322705 Query 47482 ATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGG 47541 | |||| | |||| | || || ||||| || ||| | ||||| ||||||| | Sbjct 322706 ACGACAAGGTCTACCGTTCGTCAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGTG 322765 Query 47542 GCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATAT 47579 |||||||||||||||||||||||||||||| ||| ||| Sbjct 322766 GCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAT 322803 >seq23 Length=3455761 Score = 96.9 bits (106), Expect = 3e-15 Identities = 170/247 (69%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || || || | || || ||| | ||| | || ||| || || || ||||| ||| Sbjct 479353 GCACCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 479412 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | ||||| ||| || ||||| || || ||| | |||||||||||||| || || Sbjct 479413 GAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGG 479472 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||| ||||||||| ||| || ||||| | || | |||||| | ||| Sbjct 479473 GGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCC 479532 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG---GCTTAT 127120 || || | ||| | || ||||| || || || || || || ||||||||| || ||| Sbjct 479533 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGGTTGCCTAT 479592 Query 127121 TTATTCC 127127 | ||||| Sbjct 479593 TCATTCC 479599 >seq34 Length=2752027 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || ||||| ||||| ||| | || || ||| || ||||| || |||||| ||||| Sbjct 472592 TTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 472533 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||||||| ||| || ||||| | ||| Sbjct 472532 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 472473 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | ||| || | | ||| || || | ||| | || ||||| ||||| || || || || Sbjct 472472 ATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 472414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500580080880