Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17 143 3e-29 seq12 96.9 4e-15 >seq17 Length=408792 Score = 143 bits (158), Expect = 3e-29 Identities = 1023/1631 (63%), Gaps = 42/1631 (3%) Strand=Plus/Plus Query 115561 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 115620 ||||||||||| || ||||| || || |||||||| | | ||||| || | | Sbjct 104676 AGGTAGTACATGCCTGTCTTCAGTCCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATC 104735 Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680 ||| | || || || |||| || ||||| | ||||| || || |||||| Sbjct 104736 TTGCCCATGGTGGGGTCTTTCATGTGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCG 104795 Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740 || ||||| || ||||| | || || | || ||||||||| || || |||| Sbjct 104796 CCACGATCGGCGGCCATCTGAACGACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTAC 104855 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800 ||| ||| | || | || |||| ||| || || | || ||| || | | Sbjct 104856 AGGGCCTTGACTTCGGCGGGAATATTGGGGATGTTCTGAACGGA---ACCGTTCTCGGCA 104912 Query 115801 ATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | ||| |||||| | | ||||||||||| || | || |||| | ||| Sbjct 104913 ATAATACGATTCTTCATGTTGTCAGACCAGAGACCCATGTCGACCAGGTCCTTGAGGAGC 104972 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGT 115916 |||||||| || || || || || || | ||| || ||||||| ||| Sbjct 104973 CAGGGGTTGACAACCTGGAAATCGCCAGCCAGAACACGACG-AGAGTAAATGTTGGACGT 105031 Query 115917 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGG 115976 ||| ||||| |||||||||||||| |||| ||| || | ||||| || || |||||||| Sbjct 105032 GTAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGAGAGGTGGAAGCAGTAGGCATGGG 105091 Query 115977 TGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCA 116036 ||||| | | ||||||||| | ||| || | || | | || || | ||||| Sbjct 105092 CGCCATCAACAAGCTGTTGCGAATACCATGTTCCTTGATCTGAGCTTTCAGTGACTCCCA 105151 Query 116037 GTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGC 116096 || || | || | | |||||| ||| ||||||||||||| | ||| | Sbjct 105152 ATCCCAGAGGTCAGATGGAGTAACGTTCCACATGTCATACTGGAGGATACCCTTGGAGAC 105211 Query 116097 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA-ATTC--GGAGCTCGC 116153 || || || || | || || || |||| | | || | ||| |||| || Sbjct 105212 AGGAGAGCCTTCGTAGGTGGAGTAGGGACCCTGCTCTTTGGCGAGGTTCATGGAG---GC 105268 Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGT 116212 | | || || || || | ||||| || || | |||| || | ||||||| Sbjct 105269 CGTCAATGCAGCATGGTAGAGGGTCTCGAAGATCTGCTTGTTCAGCTGTC-TGGCCTCTG 105327 Query 116213 CGGAATCAAACGCGAGACGG-CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 || || || | | ||| | || ||| | || || ||||| |||||||| || Sbjct 105328 GTGACTCGAAGGGCATGCGGAGAGCCAAGAAA-GCGTCAGCAAGACCCTGGACACCAAGA 105386 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTC 116328 |||| || || |||| |||||| || || || ||| || || || || Sbjct 105387 CCAACAGGTCGGTGTCGCATATTGCTGTTCCGTGC---CTCAGGTACAGGGTAGTGGTTG 105443 Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388 ||||||| | | || ||||| || |||| ||||| ||||||||||| | Sbjct 105444 ACGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCTCATGAAGCTTCTGA 105503 Query 116389 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448 | ||| | ||| | | | || || || || | || || || ||||| || Sbjct 105504 AAGTCATACGTGCCCGAGTTGTAATCAACGAACGAGGGCAAAGCCATGGATGCCAGGTTG 105563 Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 ||||||| |||||| | | |||||| || || || || || | ||| || || Sbjct 105564 CACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTGTGCAAAGATTGGAGCTG 105623 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 |||||||| | |||||| || || ||| ||| || |||||||||||||||| Sbjct 105624 CGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATA 105683 Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGG 116627 | || | || ||||| || || | || ||| || || | ||| | | || | | || | Sbjct 105684 AAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTG 105743 Query 116628 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC 116687 | | ||| | || ||||| ||||||| || ||| || ||||| ||||| || Sbjct 105744 ----ATCGACTTGCCGCGTCCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATC 105799 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 || | || | || || || || || || || | | || ||| | || Sbjct 105800 GCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTT 105859 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 116807 ||| || |||||||||||||| || || ||||| || || ||| ||||| ||| Sbjct 105860 TCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGC 105919 Query 116808 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 116867 || |||| || | || || || ||| | || | ||| || | || ||||||||| Sbjct 105920 ACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAACTCGAAGACATCCGCGTG 105979 Query 116868 CCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTAC 116921 ||| || || ||||| | |||| | || | |||| ||| |||| | || Sbjct 105980 CCATGGCTCAAGGTAGATAGCGAAGGCACC---GGGACGCTTGTTGCCACCCTGATCGAC 106036 Query 116922 ATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATT 116981 || ||||| || ||| || || || ||||| || | || || | ||| || || Sbjct 106037 GTATCTCGCAGTGTTGTTGAAGACACGCAGCATGGGGACAATGCCGTTTGATGTTCCGTT 106096 Query 116982 TGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG-TGGATGTGCATACCAATACCCC 117040 || || ||| ||| | || | || || || | | | ||||| || | Sbjct 106097 CGTGCCAGCAATGTAAGAACCAGTCGCAC-GAATGCGATGAACATTGAGGCCAATGCCAC 106155 Query 117041 CTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 117100 ||||| ||||||||| || || | | || || | ||||| || ||||| || Sbjct 106156 CTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATAGATACCCTCGATGCTGT 106215 Query 117101 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTG 117159 | |||| | ||| || |||||| |||| ||| ||||| || |||||||| ||| Sbjct 106216 CCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTG-GGCCTGAGGAGTACCAGCATTG 106274 Query 117160 AAGAGGGTTGG 117170 ||||| || || Sbjct 106275 AAGAGTGTGGG 106285 >seq12 Length=3698523 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| ||||| ||||| || || ||||| || || || ||| || || Sbjct 322514 GCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCCG 322455 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| ||||| ||||||||||||||||| || | || | ||| ||||||||| Sbjct 322454 GGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCACTGAAGAAGATT 322395 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699 ||||| || ||||| |||| ||||||| ||| |||| | | ||| | | | Sbjct 322394 CCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTCTTGTCGGCGATC 322335 Query 127700 CACTTCATCGCCCACTGTGCCttttt 127725 ||||||| ||||| | ||||| || Sbjct 322334 CACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506916252920