Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq37 134 3e-26 seq23 118 2e-21 seq34 87.8 4e-12 >seq37 Length=2347807 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | |||||||||||||| |||||||||||||| | ||||||||| | |||||| Sbjct 2331113 TCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGT 2331172 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | || || || || ||||| || || ||||| || |||||||| || || || || Sbjct 2331173 GCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCC 2331232 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 2331233 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAG 2331292 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| |||||||| || || || Sbjct 2331293 AGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTG 2331331 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || | ||| || || ||| || |||| ||||||||||| | ||| Sbjct 2330430 CGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTG 2330489 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || ||||||||||||||||| || ||||| ||||||||||| ||| ||| || Sbjct 2330490 CGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCC 2330549 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| |||| ||||| | | || || || | Sbjct 2330550 TCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGG 2330609 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || || || |||||||| Sbjct 2330610 GTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTG 2330647 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || || || || | ||||||||||| | || | ||||| Sbjct 2330667 AGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 2330726 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || || ||||| || |||||||| || ||| ||| || || ||| Sbjct 2330727 TCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCC 2330786 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || || | ||||| ||| Sbjct 2330787 TGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTC 2330846 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || |||||||| Sbjct 2330847 TTGCCGGTAAGGGTCTTGACGAAAATTTG 2330875 >seq23 Length=3455761 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||||||| || || ||||| || |||||| |||| ||||||||| | | ||| Sbjct 479362 CGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 479421 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| || | |||||||||||||| || ||| Sbjct 479422 CGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCT 479481 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || || | |||||| | | || || || | Sbjct 479482 TCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGG 479541 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || ||||| || || || Sbjct 479542 GTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTG 479579 >seq34 Length=2752027 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| || | ||||||||| | | ||| | ||||| || |||||||| || ||||||| Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||| || ||| || || ||||| ||||| ||| || | Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| ||| || | | || || || | ||||| ||||| ||||| || || ||||| | Sbjct 472474 CGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 472415 Query 199620 A 199620 | Sbjct 472414 A 472414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921041117479