Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq23 168 8e-37 seq34 122 1e-22 seq37 116 4e-21 >seq23 Length=3455761 Score = 168 bits (186), Expect = 8e-37 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || ||| ||||| | || |||||||| ||||| ||||||||||| |||||||| | || Sbjct 479370 CAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATC 479429 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||||||||||||||||||| ||||| ||||||||||| | || | || |||||||| Sbjct 479430 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 479489 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | |||||| ||||| | | | ||||||||||| ||||| || | ||||| || Sbjct 479490 CTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGT 479549 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| || || || || ||||| ||||| Sbjct 479550 CTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 >seq34 Length=2752027 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || || ||||||||||| ||||| || | || || ||||||||||| ||||| | Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | || ||| || ||||| || | |||||||| ||||||||||| || || || | Sbjct 472474 CGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 472415 Query 46584 AG 46585 || Sbjct 472414 AG 472413 >seq37 Length=2347807 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| || ||||| || ||||| |||||||| || |||||||| |||| || Sbjct 2330442 ACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCC 2330501 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| ||||| || || | |||||||||||| | || | || |||||| ||| Sbjct 2330502 AGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGA 2330561 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | ||||| ||| || || || | ||||| || ||| Sbjct 2330562 ATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTTG 2330621 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || |||||||| Sbjct 2330622 CCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || || | ||| || || || || || ||||||||||| || ||||| | || || Sbjct 2330898 ACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCA 2330957 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||| || || || | |||||||||||| | || | | |||||| || Sbjct 2330958 AGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGA 2331017 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| ||| | | | || || || || || || | || ||||| || Sbjct 2331018 ATCTTCGACTTGA-CGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTT 2331076 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || |||||||| ||||| ||||| Sbjct 2331077 GCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238138577240