Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq12 147 2e-30 seq23 118 1e-21 seq37 111 2e-19 seq34 93.3 4e-14 >seq12 Length=3698523 Score = 147 bits (162), Expect = 2e-30 Identities = 343/512 (67%), Gaps = 4/512 (1%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || ||||| ||| | || ||||| ||||| || || || || | Sbjct 322821 CATAACACCAGCCTTCTGATAGTCGGCGACGCGCTTCTCGAAAAAGTTGGTCTTGCCACC 322762 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || ||| | ||| || || |||||||| | | |||| |||| | | Sbjct 322761 GAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTTGACGAACGGTAGACCTTGTCGTTGCC 322702 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769 ||| |||| || || | |||||| || |||||||| || ||| |||| | | ||| | Sbjct 322701 AAGGGCGACCAGGAGACGGTCGGCAACAAACTCGATATACTGCTTCATGAGATCCGCGTT 322642 Query 132770 TAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | || || ||| |||| |||| |||||||| | || ||| ||||| ||| Sbjct 322641 CATG-CCAAGAAGA-GCACAAGGCAAGGCTTCGGTCAAGAATTCTTGTTCGATCTTGACA 322584 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 |||||| || || || | | || || || || ||| || ||| |||| Sbjct 322583 GCGTCGACGATGACAGCCTCGATGACATCCTTGCCAGGACGGTGCTTCAGATGGGAGAAC 322524 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | ||||| ||||| ||| |||| || ||||| | |||||||| |||||| || Sbjct 322523 AGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAAAAG 322464 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 |||||||||||||| || ||||| || || | ||| || || | |||||| || Sbjct 322463 GTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCACTG 322404 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| ||||| ||||| ||||| || | || |||| | |||| |||| | ||| Sbjct 322403 AAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTCTTG 322344 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||||||||| ||| ||||| |||||||| Sbjct 322343 TCGGCGATCCACTTCAGAGCCCAGTCGGCCTT 322312 Score = 140 bits (154), Expect = 3e-28 Identities = 197/276 (71%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||||||||| ||||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 322187 GTAGGTGTCAATGAGCAACGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAA 322128 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || || ||| | ||| ||||| ||| ||||||||||| || Sbjct 322127 GCCGTAGAAGCATCGAGCTTCGGGGATCTGGACTTCGCCGCTGAAGCGCTCGACCAGGTT 322068 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| ||||| || ||||| || || || || | ||| |||||| Sbjct 322067 CTCGTTGACAATGCCATCTGACGCGGCAAAGAAAGCAAGAATGTGGGAGATGAAGAACTT 322008 Query 133347 CTCGTTGTCGT---TCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | || | || | | ||||||| || |||||||||||||||| | |||||| Sbjct 322007 CTCATCTTCATTAATCTTGTTGTTCCAGTCGTGCATGTCCTTGGACAGGTCAATCTCCTC 321948 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || || |||||||| || |||||||| Sbjct 321947 GGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 321912 >seq23 Length=3455761 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 479582 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 479523 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| || || || ||| | ||||| Sbjct 479522 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 479463 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 479462 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 479403 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456 ||||| ||||| ||| || || ||| | |||||| Sbjct 479402 ATCCAGAAGGAGAGC-ACCCTCCATCTCGTGCTG 479370 >seq37 Length=2347807 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || |||||| | || |||||| | | Sbjct 2330650 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCG 2330591 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | || || ||||| ||||| | ||||| Sbjct 2330590 GACACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAG 2330531 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || || || |||||||| |||| ||||| ||| ||||||||| Sbjct 2330530 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACTCTCTCTGACTACAAC 2330471 Query 38424 ATCCA-AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| |||| ||| || ||||| ||||| || || || | || |||| Sbjct 2330470 ATCCAGAAAGAGAGC-ACCCTGCACTTGGTTCTCCGACTGCGTGGAGGCC 2330422 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| || || |||||||| |||| |||||| | || Sbjct 2331334 ATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2331275 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| |||| || Sbjct 2331274 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCA 2331216 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || || || |||| ||||| | |||||||| Sbjct 2331215 GCAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAA 2331156 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 ||| |||||||| |||| || || Sbjct 2331155 CATTCAAAAGGAGTCGACCCTCCA 2331132 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| ||||| ||| |||| |||||| || | Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | || || ||||| || ||| | ||||| Sbjct 2331046 GATACCATTGACAACG-TCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCA 2330988 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || || || || | |||||||| ||||||||| Sbjct 2330987 GCAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAA 2330928 Query 38423 CATCCA-AAAGGAAGC 38437 ||| || |||| |||| Sbjct 2330927 CATTCAGAAAGAAAGC 2330912 >seq34 Length=2752027 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || || ||| | |||| | | | Sbjct 472414 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCCGATACCATC 472473 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| |||||| | ||||| ||||| || Sbjct 472474 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 472533 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || || | || || || |||||||||||| || ||| Sbjct 472534 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCCGACTACAACATTCAGAAG 472593 Query 38433 G 38433 | Sbjct 472594 G 472594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172568670080