Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq37 93.3 2e-13 seq36 86.0 2e-11 >seq37 Length=2347807 Score = 93.3 bits (102), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || ||||| || || ||||| || || || || || ||| Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || || |||||||||||||| || || || || || || Sbjct 2331046 GATACCATTGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCAG 2330987 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || |||| || | || || |||||||| ||||| | || | | || || || Sbjct 2330986 CAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAAC 2330927 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | || || ||||||||| Sbjct 2330926 ATTCAGAAAGAAAGCACACTTCAC 2330903 >seq36 Length=2360352 Score = 86.0 bits (94), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||||||||| || || || || | ||||| ||||| || || ||||| || || || Sbjct 219733 ACTGTTCCCGCCTACTTTAACGACTCTCAACGTCAAGCCACCAAGGATGCCGGTCAGATC 219792 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||| || || ||||| || || | || || ||||| || ||||||||||| ||||| Sbjct 219793 TCTGGATTGAACGTTCTGCGTGTTGTCAACGAGCCTACCGCTGCTGCTCTAGCCTATGGT 219852 Query 451451 CT 451452 || Sbjct 219853 CT 219854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717463385996