Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq32 105 8e-18 >seq32 Length=3118845 Score = 105 bits (116), Expect = 8e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 |||||||| | || || || |||||||| | || |||||| ||| || || || Sbjct 2990519 GACATTGCCTTTGGCAGCGCCCAGAGGTTTGGCGTGCCGCTGGGATTCGGTGGCCCACAC 2990460 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 || || || || || ||||| ||| | ||| ||||||| ||||||||| | || || Sbjct 2990459 GCCGCCTTTTTCGCCGTCACAGAGAAGCACAAGCGAAAGATTCCTGGCAGATTGGTGGGC 2990400 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 | ||| ||| | ||| || || ||| || | || || ||||| | |||||| Sbjct 2990399 CTGTCCAAGGATCGACTGGGTGGCAAGGCCTACCGACTGGCCCTGCAGACGCGCGAGCAG 2990340 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 |||||| | | || || || || || ||| |||||||| ||||||| || ||||||| Sbjct 2990339 CATATCCGGCGGGAAAAGGCGACGAGCAACGTCTGCACATCACAAGCCTTGTTGGCTAAC 2990280 Query 158662 ATG 158664 ||| Sbjct 2990279 ATG 2990277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050928026320