Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq37 143 6e-29
seq23 131 4e-25
seq17 107 4e-18
>seq37
Length=2347807
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| ||| ||||| ||||| ||||| |||| ||| || | ||||| ||
Sbjct 2330898 ACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCA 2330957
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || ||||| || || || |||||||| || || || || || ||||||
Sbjct 2330958 AGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGA 2331017
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| |||||||| || || || || || ||||||| |||||
Sbjct 2331018 ATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTG 2331077
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | |||||| ||||| | |||||
Sbjct 2331078 CCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| ||| ||||| ||||| ||||| || | ||| || | ||||| ||
Sbjct 2330670 ACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCA 2330729
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || |||||||| || || || |||||||||||||| || || || ||
Sbjct 2330730 AGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGG 2330789
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || || |||||||| || || || ||||| | |||||
Sbjct 2330790 ATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTG 2330849
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || | || || ||||| | |||||||
Sbjct 2330850 CCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| | ||| | ||| || ||| |||||| || || ||||| || | ||||| |
Sbjct 2330433 AGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGG 2330492
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || || |||||||| || || || || || || || ||||| ||||||||||| ||
Sbjct 2330493 CCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCC 2330552
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || ||||| || ||| || || || || |||||||| || ||||| |||||
Sbjct 2330553 TTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTG 2330612
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | || || ||||| | ||||||
Sbjct 2330613 ATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
>seq23
Length=3455761
Score = 131 bits (144), Expect = 4e-25
Identities = 163/222 (73%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
|||||||| || || || || ||| ||| || || || ||||| |||| ||||| |
Sbjct 479364 GAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCG 479423
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| ||||||||||| || ||||| || | ||| || ||||| || || ||||||||
Sbjct 479424 GCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTC 479483
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAG 195098
||||| || || || |||||| || ||||||||||| ||| ||||| |||||
Sbjct 479484 CTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGA---CTCCACCTCAAG 479540
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || || | || || ||||| | |||||
Sbjct 479541 GGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582
>seq17
Length=408792
Score = 107 bits (118), Expect = 4e-18
Identities = 198/284 (70%), Gaps = 11/284 (4%)
Strand=Plus/Minus
Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT-GAAAGACAATGGGGAT 160645
||||| ||| | |||| | | ||||| ||||||||| |||| || ||| || || ||
Sbjct 105909 TTTTCCTCGCTCTTTGGATTCCTGATCTCTTCATGAAGCGAGTCGAGAGA-AACGGCGAC 105851
Query 160646 TGGAGCCTTTTCTGT--CCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGT 160703
|||| |||| ||| |||||||| ||||| || | |||||| || || ||||
Sbjct 105850 TGGA--CTTTAATGTGCCCCAATGAGTGCCCTGGTCTGGCTGATGTCTACGGCGATGAGT 105793
Query 160704 TCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCG-TGAAGGCC 160762
||||| |||| || || | |||||| |||||| | | ||| |||| | ||||||
Sbjct 105792 TCGAGGCTCTGTACGAGAAATACGAGGCCGAGGGACGCGGCAA----GTCGATCAAGGCC 105737
Query 160763 CAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCA 160822
|| | || ||| || |||||| | || || |||| |||| || |||||
Sbjct 105736 CAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACTGGTAACCCTTTTATGCTC 105677
Query 160823 TACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
||||||||| | | |||||||| |||||||||||| ||||
Sbjct 105676 TACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGG 105633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481074036379
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |