Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq37 143 6e-29 seq23 131 4e-25 seq17 107 4e-18 >seq37 Length=2347807 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||| ||||| ||||| ||||| |||| ||| || | ||||| || Sbjct 2330898 ACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCA 2330957 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || || || |||||||| || || || || || |||||| Sbjct 2330958 AGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGA 2331017 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| || || || || || ||||||| ||||| Sbjct 2331018 ATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTG 2331077 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | |||||| ||||| | ||||| Sbjct 2331078 CCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||| ||||| ||||| ||||| || | ||| || | ||||| || Sbjct 2330670 ACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCA 2330729 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || |||||||| || || || |||||||||||||| || || || || Sbjct 2330730 AGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGG 2330789 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || |||||||| || || || ||||| | ||||| Sbjct 2330790 ATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTG 2330849 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | ||||||| Sbjct 2330850 CCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| | ||| | ||| || ||| |||||| || || ||||| || | ||||| | Sbjct 2330433 AGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGG 2330492 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || || || |||||||| || || || || || || || ||||| ||||||||||| || Sbjct 2330493 CCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCC 2330552 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || ||||| || ||| || || || || |||||||| || ||||| ||||| Sbjct 2330553 TTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTG 2330612 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | || || ||||| | |||||| Sbjct 2330613 ATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 >seq23 Length=3455761 Score = 131 bits (144), Expect = 4e-25 Identities = 163/222 (73%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| || || || || ||| ||| || || || ||||| |||| ||||| | Sbjct 479364 GAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCG 479423 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| ||||||||||| || ||||| || | ||| || ||||| || || |||||||| Sbjct 479424 GCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTC 479483 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAG 195098 ||||| || || || |||||| || ||||||||||| ||| ||||| ||||| Sbjct 479484 CTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGA---CTCCACCTCAAG 479540 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || ||||| | ||||| Sbjct 479541 GGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 >seq17 Length=408792 Score = 107 bits (118), Expect = 4e-18 Identities = 198/284 (70%), Gaps = 11/284 (4%) Strand=Plus/Minus Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT-GAAAGACAATGGGGAT 160645 ||||| ||| | |||| | | ||||| ||||||||| |||| || ||| || || || Sbjct 105909 TTTTCCTCGCTCTTTGGATTCCTGATCTCTTCATGAAGCGAGTCGAGAGA-AACGGCGAC 105851 Query 160646 TGGAGCCTTTTCTGT--CCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGT 160703 |||| |||| ||| |||||||| ||||| || | |||||| || || |||| Sbjct 105850 TGGA--CTTTAATGTGCCCCAATGAGTGCCCTGGTCTGGCTGATGTCTACGGCGATGAGT 105793 Query 160704 TCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCG-TGAAGGCC 160762 ||||| |||| || || | |||||| |||||| | | ||| |||| | |||||| Sbjct 105792 TCGAGGCTCTGTACGAGAAATACGAGGCCGAGGGACGCGGCAA----GTCGATCAAGGCC 105737 Query 160763 CAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCA 160822 || | || ||| || |||||| | || || |||| |||| || ||||| Sbjct 105736 CAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACTGGTAACCCTTTTATGCTC 105677 Query 160823 TACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866 ||||||||| | | |||||||| |||||||||||| |||| Sbjct 105676 TACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGG 105633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481074036379