Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq37 147 1e-30
seq23 95.1 8e-15
seq34 82.4 5e-11
>seq37
Length=2347807
Score = 147 bits (162), Expect = 1e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||||||||||||||||||||| ||||| |||||| | || |||| || || ||
Sbjct 2330903 GTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGTTG 2330962
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| || ||||| ||||| || ||||||||| | || | |||||||| || ||||||
Sbjct 2330963 CTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGAATCTT 2331022
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
| |||||| | || | ||| || ||| || |||| ||| ||||| || || ||
Sbjct 2331023 CGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGT 2331082
Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981
|||||| || || |||||||||||
Sbjct 2331083 GAGAGTTTTAACGAAGATCTGCAT 2331106
Score = 105 bits (116), Expect = 4e-18
Identities = 154/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | ||||| |||||||| ||||| ||||| || || | || | || ||
Sbjct 2330441 AACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTC 2330500
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| ||||||||||| || || || |||||||| | || | |||||||| ||
Sbjct 2330501 CAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTG 2330560
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947
||||||| || || || ||||||| | ||| | ||| || || | ||| || |
Sbjct 2330561 AATCTTCGACTTCAC--AT--TATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAG 2330616
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || || || || ||||| || || || |||||
Sbjct 2330617 TCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/208 (72%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| |||||||||||||||||||| ||||| |||||| | || |||| || || ||
Sbjct 2330675 GTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTG 2330734
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| || ||||| || || || ||||| ||| | || | |||||||| || |||||
Sbjct 2330735 CTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTT 2330794
Query 34898 CTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTC 34953
| || || || ||||||| | ||| | ||| || || | ||| || || || |
Sbjct 2330795 CGACTTCAC--AT--TATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTGC 2330850
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || || ||||| || || || |||||
Sbjct 2330851 CGGTAAGGGTCTTGACGAAAATTTGCAT 2330878
>seq23
Length=3455761
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| ||||| || || | || |||| || ||||| || |||
Sbjct 479386 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 479445
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || || | ||| |||||||| | || | || |||||||| ||||| |||
Sbjct 479446 GCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGACTTG 479505
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
|| | || | || | | ||| || || | ||| || || || |||||||| |||
Sbjct 479506 ACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 479565
Query 34965 TTCACAAAGATCTGCAT 34981
||||| |||||||||||
Sbjct 479566 TTCACGAAGATCTGCAT 479582
>seq34
Length=2752027
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||||||||| ||||| ||||| | || |||| || ||||| || || || || ||
Sbjct 472592 TTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 472533
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || ||||||||| | || | ||||||||||| ||||| ||||| || |
Sbjct 472532 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT--T 472477
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || | ||| || || | ||| ||||| || ||||| || ||||||||
Sbjct 472476 GTCGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 472417
Query 34970 AAAG 34973
|||
Sbjct 472416 GAAG 472413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633453610536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |