Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq17 149 7e-31 >seq17 Length=408792 Score = 149 bits (164), Expect = 7e-31 Identities = 465/714 (65%), Gaps = 12/714 (2%) Strand=Plus/Plus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 ||| || ||||| || || |||| | | | ||||| || ||||| || ||||| || | Sbjct 105788 CTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGT 105847 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244 ||| || | | | | |||| |||| || | ||| || ||||||||||| | || Sbjct 105848 CCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGAGGAA 105907 Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 | ||| | || | | ||| || ||||| ||| | || |||||||| || | Sbjct 105908 AAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAACTCGAA 105967 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 | ||| || |||||||| || | || || || | |||| || || || || || || Sbjct 105968 GACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACC 106027 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 ||||| | ||||| ||||| ||||| | || | | ||| |||||||| || ||||| Sbjct 106028 CTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGCATGGGGACAATGCCGTTTGA 106087 Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA--ATTGAAATA 48482 | | || || || || | ||| ||| ||| | || | || | | |||| | Sbjct 106088 TGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGAATGCGATGAACATTG--AGG 106145 Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542 || || ||||||||||| || || || | ||||| || ||||| ||||| || || Sbjct 106146 CCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATAGATACCC 106205 Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTT 48602 || || || || || |||| | | ||||| || ||||| ||| | ||| ||| Sbjct 106206 TCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTGGGCCTGAGGAGTA 106265 Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATAT 48662 || | ||| || | ||| ||||||||||| | || | || || | | || || Sbjct 106266 CCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAGACATGAGGTTGTAC 106325 Query 48663 GTTTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGATACACGCATTAACA 48720 || || || || || | || ||| | ||||| | || |||||||| | || Sbjct 106326 GTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATACCAACAGCAACACGCATAATCA 106383 Query 48721 TATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATG 48780 ||| || || | ||| |||||||| || | |||| || |||||| |||| | Sbjct 106384 TATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAGGAGGTATGATCGCTCCAGGG 106443 Query 48781 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGA 48832 | || || ||||| || | ||| ||||| ||| ||||| | ||| | ||| Sbjct 106444 TCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCG--ATCATAGACAATGGCTGA 106495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108540024680