Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq17 149 7e-31
>seq17
Length=408792
Score = 149 bits (164), Expect = 7e-31
Identities = 465/714 (65%), Gaps = 12/714 (2%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||| || ||||| || || |||| | | | ||||| || ||||| || ||||| || |
Sbjct 105788 CTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGT 105847
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| || | | | | |||| |||| || | ||| || ||||||||||| | ||
Sbjct 105848 CCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGAGGAA 105907
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
| ||| | || | | ||| || ||||| ||| | || |||||||| || |
Sbjct 105908 AAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAACTCGAA 105967
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
| ||| || |||||||| || | || || || | |||| || || || || || ||
Sbjct 105968 GACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACC 106027
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
||||| | ||||| ||||| ||||| | || | | ||| |||||||| || |||||
Sbjct 106028 CTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGCATGGGGACAATGCCGTTTGA 106087
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA--ATTGAAATA 48482
| | || || || || | ||| ||| ||| | || | || | | |||| |
Sbjct 106088 TGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGAATGCGATGAACATTG--AGG 106145
Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542
|| || ||||||||||| || || || | ||||| || ||||| ||||| || ||
Sbjct 106146 CCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATAGATACCC 106205
Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTT 48602
|| || || || || |||| | | ||||| || ||||| ||| | ||| |||
Sbjct 106206 TCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTGGGCCTGAGGAGTA 106265
Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATAT 48662
|| | ||| || | ||| ||||||||||| | || | || || | | || ||
Sbjct 106266 CCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAGACATGAGGTTGTAC 106325
Query 48663 GTTTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGATACACGCATTAACA 48720
|| || || || || | || ||| | ||||| | || |||||||| | ||
Sbjct 106326 GTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATACCAACAGCAACACGCATAATCA 106383
Query 48721 TATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATG 48780
||| || || | ||| |||||||| || | |||| || |||||| |||| |
Sbjct 106384 TATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCAGGAGGTATGATCGCTCCAGGG 106443
Query 48781 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGA 48832
| || || ||||| || | ||| ||||| ||| ||||| | ||| | |||
Sbjct 106444 TCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCG--ATCATAGACAATGGCTGA 106495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108540024680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |