Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq37 120 2e-21 seq36 100 2e-15 seq35 86.0 5e-11 >seq37 Length=2347807 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| ||||| ||||| || |||||||| ||| ||||| || | || || | Sbjct 2330888 GAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCG 2330947 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| |||||||| || || ||||| || || | ||||| || || || || || || Sbjct 2330948 GCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTC 2331007 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||||||||| || || || ||||| ||||||| | || | | ||||| | Sbjct 2331008 CTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAG-GACTCGACCTCGAGGG 2331066 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || ||||| |||||||||||||| || ||||| Sbjct 2331067 TAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106 >seq36 Length=2360352 Score = 100 bits (110), Expect = 2e-15 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || ||||| ||||| ||||||||||| || || ||||| || | || Sbjct 219733 ACTGTTCCCGCCTACTTTAACGACTCTCAACGTCAAGCCACCAAGGATGCCGGTCAGATC 219792 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | || ||||| ||| || |||| || ||||| |||||||| || || ||||| Sbjct 219793 TCTGGATTGAACGTTCTGCGTGTTGTCAACGAGCCTACCGCTGCTGCTCTAGCCTATGGT 219852 Query 550529 CTTGATAA 550536 ||||| || Sbjct 219853 CTTGAGAA 219860 >seq35 Length=2561820 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| || || || || || || || || ||||||||||| || ||||| Sbjct 585033 GCCGTCATCACTGTCCCTGCTTACTTCAACGATTCCCAGCGTCAAGCTACCAAGGATGCG 585092 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | || | || || |||||||| || |||||||| ||||| || || ||||| || Sbjct 585093 GGTCTCATCTCGGGCCTGAATGTTCTCCGAATTATCAACGAACCCACCGCCGCTGCCATT 585152 Query 550520 GCATATGGACTTGATAA 550536 || || || || || || Sbjct 585153 GCCTACGGTCTCGACAA 585169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294043273130