Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq37 120 2e-21
seq36 100 2e-15
seq35 86.0 5e-11
>seq37
Length=2347807
Score = 120 bits (132), Expect = 2e-21
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| ||||| ||||| || |||||||| ||| ||||| || | || || |
Sbjct 2330888 GAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCG 2330947
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| |||||||| || || ||||| || || | ||||| || || || || || ||
Sbjct 2330948 GCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTC 2331007
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434
||||||||||| || || || ||||| ||||||| | || | | ||||| |
Sbjct 2331008 CTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAG-GACTCGACCTCGAGGG 2331066
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || || ||||| |||||||||||||| || |||||
Sbjct 2331067 TAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
>seq36
Length=2360352
Score = 100 bits (110), Expect = 2e-15
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || ||||| ||||| ||||||||||| || || ||||| || | ||
Sbjct 219733 ACTGTTCCCGCCTACTTTAACGACTCTCAACGTCAAGCCACCAAGGATGCCGGTCAGATC 219792
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| | || ||||| ||| || |||| || ||||| |||||||| || || |||||
Sbjct 219793 TCTGGATTGAACGTTCTGCGTGTTGTCAACGAGCCTACCGCTGCTGCTCTAGCCTATGGT 219852
Query 550529 CTTGATAA 550536
||||| ||
Sbjct 219853 CTTGAGAA 219860
>seq35
Length=2561820
Score = 86.0 bits (94), Expect = 5e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || || ||||| || || || || || || || || ||||||||||| || |||||
Sbjct 585033 GCCGTCATCACTGTCCCTGCTTACTTCAACGATTCCCAGCGTCAAGCTACCAAGGATGCG 585092
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| | || | || || |||||||| || |||||||| ||||| || || ||||| ||
Sbjct 585093 GGTCTCATCTCGGGCCTGAATGTTCTCCGAATTATCAACGAACCCACCGCCGCTGCCATT 585152
Query 550520 GCATATGGACTTGATAA 550536
|| || || || || ||
Sbjct 585153 GCCTACGGTCTCGACAA 585169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294043273130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |