Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq17 232 1e-55 seq12 131 3e-25 >seq17 Length=408792 Score = 232 bits (256), Expect = 1e-55 Identities = 838/1285 (65%), Gaps = 56/1285 (4%) Strand=Plus/Plus Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGG 221474 ||||| ||||| ||||||| |||||| |||||| |||||| || || | ||||||| | Sbjct 105269 CGTCAATGCAGCATGGTAGAGGGTCTCGAAGATCTGCTTGTTCAG-CTGTCTGGCCTCTG 105327 Query 221475 GAGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 | || ||||||||| || || | ||||| |||| || || ||||| || || | | Sbjct 105328 GTGACTCGAAGGGCATGCGGAGAGCCAAGAAAG-CGTCAGCAAGACCCTGGACACCAAGA 105386 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || | || | ||||| | | ||| | || || || || || || || ||||| Sbjct 105387 CCAACAGGTCGGTGTCGCATATTGCTGTTCCGT--GCCTCAGGTACAGGGTAGTGGTTGA 105444 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 ||||||| | ||||| || || || | ||| | ||||| |||||||| Sbjct 105445 CGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCTCATGAAGCTTCTGA- 105503 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 || | || ||| || || || || || | ||||||| || Sbjct 105504 -----AAGTCATACGTGCCCGAGTTGTAA------TCAACGAACG-----AGGGCAAAGC 105547 Query 221712 --TGG---CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGT 221766 ||| ||||||| ||||| || ||||| || | |||| ||||||||||| Sbjct 105548 CATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTGT 105607 Query 221767 ACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 || || ||| || |||||| || |||| || || || |||||| ||| ||| Sbjct 105608 GCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGT 105666 Query 221827 G-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 | ||||||||||||||||| || |||||||| ||| ||| | || || | || Sbjct 105667 GATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACC 105726 Query 221886 AGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945 |||| | ||||| || || |||| | ||||||| || | | | || || Sbjct 105727 AGAGCT-TCTGGGCCTTGA--TCGACTTGCCGCGTCCCTCGGCCTCGTATTTCTCG-TAC 105782 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | | |||| || ||||| | || |||| || || ||| ||| |||| Sbjct 105783 AGAGCCT--CGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACA 105840 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | | | |||||| ||| ||| | ||| | || ||||||||| || || ||||| || Sbjct 105841 TTAAAGTCCAGTCGCCGTT-TCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGA 105899 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || | || ||||| | | || |||||| ||||| ||| || | ||||| | | Sbjct 105900 GCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGA 105959 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 ||||| || | || |||||||| ||||| || |||| || | || ||||| |||||| Sbjct 105960 AACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTG 106019 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 |||||||||||||| || ||| ||| | |||||||| || || | || || | Sbjct 106020 TTGCCACCCTGATCGACGTATCTC-GCAGTGTTGTTGAAGACACGCAGCATGGGGACAAT 106078 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGC 222303 ||||| ||| ||||| ||||| |||||| | ||| || | | | | | Sbjct 106079 GCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGAATGCGATGAAC 106138 Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363 | | ||| || ||||| || || ||||||||||| ||| |||| || ||||| Sbjct 106139 ATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATA 106198 Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423 ||| ||||| || ||||||||| | || | |||||| || || |||| || | | Sbjct 106199 GATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTGGGCCTG 106258 Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483 | | || || || || || |||||| || ||||| ||||| |||||||| || Sbjct 106259 AGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAGACATGAG 106318 Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA----ATCTGCATGGCGCAT 222538 | ||||||||| | ||| || ||| | || ||| || | | ||| |||| Sbjct 106319 GTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACCAACAGCAACACGCA- 106377 Query 222539 CTCATGTACATGTACTGGGGCCTCTC--CACAGGACCCTTGGAGCTGGAGAGCAGGTACG 222596 | || ||| | ||| |||| ||| || || | ||||| || ||||| | Sbjct 106378 -TAAT---CATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCT--TCAGGAGGTATG 106431 Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGG 222656 || ||||| |||||||| |||||||| | | || || |||| | | || | || Sbjct 106432 ATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCGATCATAGACAATGG 106491 Query 222657 CGGCGTCCAGCTCCGACTTGTGCTT 222681 | | ||| || ||| ||||||||| Sbjct 106492 CTGAGTCAAGTTCCTCCTTGTGCTT 106516 >seq12 Length=3698523 Score = 131 bits (144), Expect = 3e-25 Identities = 319/489 (65%), Gaps = 5/489 (1%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| ||||||||||| | | ||| | | || || | | |||| || | ||||| Sbjct 322321 TGGGCTCTGAAGTGGATCGCCGACAAGAACTCCACCTTCGCCCAGCGTCTCATTGCCTTC 322380 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || || ||||| ||||| ||||| ||| | || || | ||||||||| | ||| || Sbjct 322381 GCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTTCTGGTTGAAGAAG 322440 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || |||||||| || |||||||||||||||||| | ||||| ||||| Sbjct 322441 CGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCGCGACGAAGGTCTG 322500 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073 |||| |||||||||||| | || | | | ||| || ||| ||| | || Sbjct 322501 CACACCGATTTTGCCTGCTTACTGTTCTC---CCATCTGAAGCACCGTCCTGGCAAGGAT 322557 Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133 | || | | ||||| || ||||| ||||||| | || || Sbjct 322558 GTCATCGAGGCTGTCATCGTCGACGCTGTCAAGATCGAACAAGAATTCTTGACCGAAGCC 322617 Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGAGTATGT 26192 | ||||||||| | || ||||||| || || || |||| ||| Sbjct 322618 TTGCCTTGTGCTCTTCTTGGCATGAAC-GCGGATCTCATGAAGCAGTATATCGAGTTTGT 322676 Query 26193 GGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTT 26252 ||||||| ||| ||| | || || || || ||||| || || | ||||| || Sbjct 322677 TGCCGACCGTCTCCTGGTCGCCCTTGGCAACGACAAGGTCTACCGTTCGTCAAACCCCTT 322736 Query 26253 CGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGG 26312 |||||| ||||| ||||| ||| | | || ||||||||||| || || ||| | |||| Sbjct 322737 CGACTTCATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTCGC 322796 Query 26313 CGACTATCA 26321 ||||||||| Sbjct 322797 CGACTATCA 322805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844370409280