Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq17 232 1e-55
seq12 131 3e-25
>seq17
Length=408792
Score = 232 bits (256), Expect = 1e-55
Identities = 838/1285 (65%), Gaps = 56/1285 (4%)
Strand=Plus/Plus
Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGG 221474
||||| ||||| ||||||| |||||| |||||| |||||| || || | ||||||| |
Sbjct 105269 CGTCAATGCAGCATGGTAGAGGGTCTCGAAGATCTGCTTGTTCAG-CTGTCTGGCCTCTG 105327
Query 221475 GAGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
| || ||||||||| || || | ||||| |||| || || ||||| || || | |
Sbjct 105328 GTGACTCGAAGGGCATGCGGAGAGCCAAGAAAG-CGTCAGCAAGACCCTGGACACCAAGA 105386
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| | || | ||||| | | ||| | || || || || || || || |||||
Sbjct 105387 CCAACAGGTCGGTGTCGCATATTGCTGTTCCGT--GCCTCAGGTACAGGGTAGTGGTTGA 105444
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
||||||| | ||||| || || || | ||| | ||||| ||||||||
Sbjct 105445 CGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCTCATGAAGCTTCTGA- 105503
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
|| | || ||| || || || || || | ||||||| ||
Sbjct 105504 -----AAGTCATACGTGCCCGAGTTGTAA------TCAACGAACG-----AGGGCAAAGC 105547
Query 221712 --TGG---CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGT 221766
||| ||||||| ||||| || ||||| || | |||| |||||||||||
Sbjct 105548 CATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTGT 105607
Query 221767 ACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826
|| || ||| || |||||| || |||| || || || |||||| ||| |||
Sbjct 105608 GCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGT 105666
Query 221827 G-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885
| ||||||||||||||||| || |||||||| ||| ||| | || || | ||
Sbjct 105667 GATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACC 105726
Query 221886 AGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945
|||| | ||||| || || |||| | ||||||| || | | | || ||
Sbjct 105727 AGAGCT-TCTGGGCCTTGA--TCGACTTGCCGCGTCCCTCGGCCTCGTATTTCTCG-TAC 105782
Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005
||||| | | |||| || ||||| | || |||| || || ||| ||| ||||
Sbjct 105783 AGAGCCT--CGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACA 105840
Query 222006 TCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
| | | |||||| ||| ||| | ||| | || ||||||||| || || ||||| ||
Sbjct 105841 TTAAAGTCCAGTCGCCGTT-TCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGA 105899
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || ||||| | | || |||||| ||||| ||| || | ||||| | |
Sbjct 105900 GCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGA 105959
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
||||| || | || |||||||| ||||| || |||| || | || ||||| ||||||
Sbjct 105960 AACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTG 106019
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243
|||||||||||||| || ||| ||| | |||||||| || || | || || |
Sbjct 106020 TTGCCACCCTGATCGACGTATCTC-GCAGTGTTGTTGAAGACACGCAGCATGGGGACAAT 106078
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGC 222303
||||| ||| ||||| ||||| |||||| | ||| || | | | | |
Sbjct 106079 GCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGAATGCGATGAAC 106138
Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363
| | ||| || ||||| || || ||||||||||| ||| |||| || |||||
Sbjct 106139 ATTGAGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATA 106198
Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423
||| ||||| || ||||||||| | || | |||||| || || |||| || | |
Sbjct 106199 GATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTGGGCCTG 106258
Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483
| | || || || || || |||||| || ||||| ||||| |||||||| ||
Sbjct 106259 AGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAGACATGAG 106318
Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA----ATCTGCATGGCGCAT 222538
| ||||||||| | ||| || ||| | || ||| || | | ||| ||||
Sbjct 106319 GTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACCAACAGCAACACGCA- 106377
Query 222539 CTCATGTACATGTACTGGGGCCTCTC--CACAGGACCCTTGGAGCTGGAGAGCAGGTACG 222596
| || ||| | ||| |||| ||| || || | ||||| || ||||| |
Sbjct 106378 -TAAT---CATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCT--TCAGGAGGTATG 106431
Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGG 222656
|| ||||| |||||||| |||||||| | | || || |||| | | || | ||
Sbjct 106432 ATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCGATCATAGACAATGG 106491
Query 222657 CGGCGTCCAGCTCCGACTTGTGCTT 222681
| | ||| || ||| |||||||||
Sbjct 106492 CTGAGTCAAGTTCCTCCTTGTGCTT 106516
>seq12
Length=3698523
Score = 131 bits (144), Expect = 3e-25
Identities = 319/489 (65%), Gaps = 5/489 (1%)
Strand=Plus/Plus
Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893
||||| ||||||||||| | | ||| | | || || | | |||| || | |||||
Sbjct 322321 TGGGCTCTGAAGTGGATCGCCGACAAGAACTCCACCTTCGCCCAGCGTCTCATTGCCTTC 322380
Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
|| || || ||||| ||||| ||||| ||| | || || | ||||||||| | ||| ||
Sbjct 322381 GCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTTCTGGTTGAAGAAG 322440
Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013
|| |||||||| || |||||||||||||||||| | ||||| |||||
Sbjct 322441 CGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCGCGACGAAGGTCTG 322500
Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073
|||| |||||||||||| | || | | | ||| || ||| ||| | ||
Sbjct 322501 CACACCGATTTTGCCTGCTTACTGTTCTC---CCATCTGAAGCACCGTCCTGGCAAGGAT 322557
Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133
| || | | ||||| || ||||| ||||||| | || ||
Sbjct 322558 GTCATCGAGGCTGTCATCGTCGACGCTGTCAAGATCGAACAAGAATTCTTGACCGAAGCC 322617
Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGAGTATGT 26192
| ||||||||| | || ||||||| || || || |||| |||
Sbjct 322618 TTGCCTTGTGCTCTTCTTGGCATGAAC-GCGGATCTCATGAAGCAGTATATCGAGTTTGT 322676
Query 26193 GGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTT 26252
||||||| ||| ||| | || || || || ||||| || || | ||||| ||
Sbjct 322677 TGCCGACCGTCTCCTGGTCGCCCTTGGCAACGACAAGGTCTACCGTTCGTCAAACCCCTT 322736
Query 26253 CGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGG 26312
|||||| ||||| ||||| ||| | | || ||||||||||| || || ||| | ||||
Sbjct 322737 CGACTTCATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTCGC 322796
Query 26313 CGACTATCA 26321
|||||||||
Sbjct 322797 CGACTATCA 322805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844370409280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |