Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq37 127 1e-23 >seq37 Length=2347807 Score = 127 bits (140), Expect = 1e-23 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| ||||| ||||| || |||||||| || || || |||| || || Sbjct 2330658 CGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTG 2330717 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||| ||||||||||| |||||||| ||||| || || ||||| |||||||| || Sbjct 2330718 CGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCC 2330777 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||| || || ||||| || ||| || ||||| || | | | | || || Sbjct 2330778 TCCTTATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGA-CCTCTAG 2330836 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||| || ||||| || ||||| ||||||||||| Sbjct 2330837 GGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTG 2330875 Score = 123 bits (136), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| ||||| |||||||| |||||||| || || || || | || || Sbjct 2330886 CGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTG 2330945 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||| ||||||||||| |||||||| || || || || || || || || || || Sbjct 2330946 CGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCC 2331005 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||| ||||||||||| ||||| ||||| ||||||| | || ||| Sbjct 2331006 TCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGG 2331065 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || |||||||| |||||||| || || Sbjct 2331066 GTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTG 2331103 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || | || || || || ||||| | || || |||| ||||| Sbjct 2330429 ACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGT 2330488 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || || || |||||||| |||||||| || || || || ||||||||||| || Sbjct 2330489 GCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCC 2330548 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| || |||||||| || ||| || ||||| || | | | | ||| | Sbjct 2330549 CTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGA-CTTCTA 2330607 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| ||||| || ||||| || ||||| ||||||||||| Sbjct 2330608 GGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTG 2330647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177612890476