Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq37 127 1e-23
>seq37
Length=2347807
Score = 127 bits (140), Expect = 1e-23
Identities = 161/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| |||||||| ||||| ||||| || |||||||| || || || |||| || ||
Sbjct 2330658 CGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTG 2330717
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | ||| ||||||||||| |||||||| ||||| || || ||||| |||||||| ||
Sbjct 2330718 CGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCC 2330777
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730
||||| || || ||||| || ||| || ||||| || | | | | || ||
Sbjct 2330778 TCCTTATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGA-CCTCTAG 2330836
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| ||||| || ||||| || ||||| |||||||||||
Sbjct 2330837 GGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTG 2330875
Score = 123 bits (136), Expect = 2e-22
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| |||||||| ||||| |||||||| |||||||| || || || || | || ||
Sbjct 2330886 CGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTG 2330945
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | ||| ||||||||||| |||||||| || || || || || || || || || ||
Sbjct 2330946 CGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCC 2331005
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731
||||| ||||||||||| ||||| ||||| ||||||| | || |||
Sbjct 2331006 TCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGG 2331065
Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || |||||||| |||||||| || ||
Sbjct 2331066 GTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTG 2331103
Score = 102 bits (112), Expect = 5e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| || | || || || || ||||| | || || |||| |||||
Sbjct 2330429 ACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGT 2330488
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | || || || |||||||| |||||||| || || || || ||||||||||| ||
Sbjct 2330489 GCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCC 2330548
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || |||||||| || ||| || ||||| || | | | | ||| |
Sbjct 2330549 CTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGA-CTTCTA 2330607
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| ||||| || ||||| || ||||| |||||||||||
Sbjct 2330608 GGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTG 2330647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177612890476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |