Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq17 205 1e-47 seq12 93.3 5e-14 >seq17 Length=408792 Score = 205 bits (226), Expect = 1e-47 Identities = 986/1549 (64%), Gaps = 58/1549 (4%) Strand=Plus/Minus Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAG 75363 |||| || ||| | || || ||||||||||||||||| || || || || |||| Sbjct 106300 TTCACACATGCATCTCCCACACTCTTCAATGCTGGTACTCCTCAGGCC-CAACTGTCTTC 106242 Query 75364 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 75423 ||||| || ||| || ||||||||| ||| | |||||||||| || || | | Sbjct 106241 CTGCTTTCTGGTCGACATGAAGGAGGACAGCATCGAGGGTATCTATGACACCCTGAAGAC 106182 Query 75424 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 75483 ||||| ||||||||| ||| || || ||||| | | | ||| | | || Sbjct 106181 CTGTGCCATGATCTCAAAGATGGCAGGTGGCATTGGCCTCAATGTTCATCGCATTCGTGC 106122 Query 75484 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 75543 | | ||| ||| || || || || |||| | || ||| | || ||||| || Sbjct 106121 GACTGGTTCTTACATTGCTGGCACGAACGGAACATCAAACGGCATTGTCCCCATGCTGCG 106062 Query 75544 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTC 75597 || || ||| ||| ||| | || || |||| | || ||||| | || | Sbjct 106061 TGTCTTCAACAACACTGCGAGATACGTCGATCAGGGTGGCAACAAGCGTCCC---GGTGC 106005 Query 75598 CATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACT 75657 | |||| ||||| | || |||||||| || ||| || | ||||| ||||| | || Sbjct 106004 CTTCGCTATCTACCTTGAGCCATGGCACGCGGATGTCTTCGAGTTTCTTGATCTCCGTAA 105945 Query 75658 CAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGT--GGATTCC 75714 ||||| || | || || | || ||| | | ||||| |||| || || | ||||||| Sbjct 105944 GAACCACGGCAAGGAGGAAG-TCCGTGCTCGCGATCT--TTTCCTCGCTCTTTGGATTCC 105888 Query 75715 AGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAA 75774 || || ||||||||||| || ||| || | ||| || | | || || | | Sbjct 105887 TGATCTCTTCATGAAGCGAGTCGAGAGAAACGGCGACTGGACTTTAATGTGCCCCAATGA 105828 Query 75775 GGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA 75834 | || ||||| | || | || || ||||| || || || ||| || || || Sbjct 105827 GTGCCCTGGTCTGGCTGATGTCTACGGCGATGAGTTCGAGGCTCTGTACGAGAAATACGA 105768 Query 75835 AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCA 75893 | ||||| | | ||| ||| | || | | || | | ||| | || || ||| Sbjct 105767 GGCCGAGGGACGCGGCAAGTCGAT----CAAGGCCCAGAAGCTCTGGTATGCCATCCTCG 105712 Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 | | ||||| |||||||| | || | |||||| ||||||||| || ||| |||| Sbjct 105711 AGGCGCAGACCGAGACTGGTAACCCTTTTATGCTCTACAAGGATCACTGCAACCGCAAGA 105652 Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013 | ||||| ||||| | || || ||| ||||| ||||||||||| || || | |||| Sbjct 105651 GCAACCAGAAGAACCTTGGCACCATCCGCAGCTCCAATCTTTGCACAGAGATCATCGAGT 105592 Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATG 76073 || | | |||||| ||||| ||||| ||||||| || || | || || | Sbjct 105591 ACTGCGCTCCTGATGAGGTTGCTGTGTGCAACCTGGCATCCATGGCTTTGCCCTCGTTCG 105532 Query 76074 TCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTA 76133 | || | | | |||| | ||| | | | || |||||||| ||||| || | ||| Sbjct 105531 TTGATTACAACTCGGGCACGTATGACTTTCAGAAGCTTCATGAGGTCACACAGGTCGTTG 105472 Query 76134 CCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAA 76190 ||||| ||| | || ||| || || || || |||| || || | Sbjct 105471 TTCGCAATCTGAACAAGATTATCGACGTCAACCACTACCCTGTACCTGAG---GCACGGA 105415 Query 76191 AGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTA 76250 | |||||||||||| ||||| ||||| | ||||| || ||||| || || | Sbjct 105414 ACAGCAATATGCGACACCGACCTGTTGGTCTTGGTGTCCAGGGTCTTGCTGACG-----C 105360 Query 76251 TTTTGTGCCGCTACGCA-----TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTAT 76305 ||| || | || |||| || || ||| || |||| || |||| | || Sbjct 105359 TTTCTTGGCTCTCCGCATGCCCTTCGAGTCACCAGAGGCCAGACAGCTGAACAAGCAGAT 105300 Query 76306 CTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA-TTGGCTGAAGCCCAAG 76364 ||| || ||| | || || || | | | || | |||| | || ||| || | Sbjct 105299 CTTCGAGACCCTCTACCATGC-TGCATTGACGGCCTCCATGAACCTCGCCAAAGAGCAGG 105241 Query 76365 GTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGT 76424 || |||| || | || || ||||| | ||| | || | || |||| ||| |||| Sbjct 105240 GTCCCTACTCCACCTACGAAGGCTCTCCTGTCTCCAAGGGTATCCTCCAGTATGACATGT 105181 Query 76425 GGGAAGGTGAAACCAAGCTCAACTACGACTGGGAT--GTTCTCAAGGAACGC----ATCA 76478 |||| || | || | || | || ||||||| | ||| ||| || |||| Sbjct 105180 -GGAACGTTACTCC-ATCTGACCT----CTGGGATTGGGAGTCACTGAAAGCTCAGATCA 105127 Query 76479 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 76538 |||| | ||| |||| ||||| | |||||||| || ||||| || || |||||| | | Sbjct 105126 AGGAACATGGTATTCGCAACAGCTTGTTGATGGCGCCCATGCCTACTGCTTCCACCTCTC 105067 Query 76539 AAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAA 76598 | ||| |||| || ||||| ||||| || || ||||| | ||||| ||| | | Sbjct 105066 AGATCCTGGGCAACAATGAGTGCTTCGAGCCCTACACGTCCAACATTTACTCTCGTCGTG 105007 Query 76599 CCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTG 76658 || || || || || |||||||| ||| |||| ||||| | || | Sbjct 105006 TTCTGGCTGGCGATTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGACCTGGTCGACATGG 104947 Query 76659 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 76718 |||||||||| | | |||||| ||| || | | | |||||| |||| || | Sbjct 104946 GTCTCTGGTCTGACAACATGAAGAATCGTATTATTGCCGAGAACGGTTCCGTTCAGAACA 104887 Query 76719 TCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC---AAGA 76775 || | |||| || | || ||||| || ||| || || ||||||||| ||| Sbjct 104886 TCCCCAATATTCCCGCCGAAGTCAAGGCCCTGTACAAGACCGTTTGGGAAATCTCACAGA 104827 Query 76776 TGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCA 76824 || ||| || | |||||||| |||||||| ||||||||| || Sbjct 104826 GGA---CCGTCGTTCAGATGGCCGCCGATCGTGGCGCCTTCATTGACCA 104781 >seq12 Length=3698523 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| |||| ||| | | | |||| ||| | |||||||| |||| Sbjct 322309 AAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAACTC-CACCTTCGCCCAGCG 322367 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| || || || ||||| ||||||||| || | ||| |||| | Sbjct 322368 TCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTT 322427 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 |||||||||||||| ||||| ||||| ||| | ||| || || || || ||||| || Sbjct 322428 CTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCG 322487 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || ||||| ||| || |||||| Sbjct 322488 CGACGAAGGTCTGCACACCGATTTTGCC 322515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569324086560