Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq17 125 2e-23
seq23 100 8e-16
seq16 91.5 4e-13
seq1 86.0 2e-11
>seq17
Length=408792
Score = 125 bits (138), Expect = 2e-23
Identities = 559/879 (64%), Gaps = 10/879 (1%)
Strand=Plus/Plus
Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685
||| ||| || | ||||| ||| || || || || ||||||||| | |||||||
Sbjct 105586 CGCAGTACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCT 105645
Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745
|||| || | ||| || ||||||||| || || | ||| | || ||||| |||
Sbjct 105646 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCT 105705
Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805
| || || || || |||||| | |||| || || |||| | || | |
Sbjct 105706 GCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTGATCGACTTGCCGCGTC---CCT 105762
Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
| | ||| |||||| ||||| | | | || || ||||| |||| ||| ||||
Sbjct 105763 CGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAG 105822
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|||||| || |||||| | | | ||| || | || |||| ||| || |
Sbjct 105823 GGCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGA 105882
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACT-CCTCATCGCCGTGA 155984
|||| ||||| ||| |||||| || | || |||| |||| | ||||||
Sbjct 105883 GATCAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACG-GACTTCCTCCTTGCCGTGG 105941
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| || || || | || || | ||| | || |||||| || || |||||
Sbjct 105942 TTCTTACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCG 106001
Query 156045 AAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| ||| | | | |||||||||||||| || || | ||||| || |||||||||
Sbjct 106002 AAGGCACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACA 106061
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| ||||| || | ||| || || || || || || || || ||| | |||||||
Sbjct 106062 CGCAGCATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTC 106121
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220
| |||| ||||| || || ||||| ||||||| |||| || || || || ||
Sbjct 106122 GCACGAATGCGATGAACATTGAGGCCAATGCCACCTG-CCATCTTTGAGATCATGGCACA 106180
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280
||| | || | | ||||| || || || || | ||| | ||| ||||
Sbjct 106181 GGTCTTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCA 106240
Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340
||| | ||| | | || || ||||| ||||| ||||| || | |||||| | ||
Sbjct 106241 GGAAGACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAA 106300
Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400
||||| ||||||| | ||| ||||| | | | | || | || | || ||
Sbjct 106301 GTACTTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGAT 106360
Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460
|| | || || | ||| ||||||||| || ||||| |||| || | |
Sbjct 106361 ACCAACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTT 106420
Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
||| ||||||| || ||||| || || || || || ||
Sbjct 106421 CAGGAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTA 106459
>seq23
Length=3455761
Score = 100 bits (110), Expect = 8e-16
Identities = 191/280 (68%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649
|| || |||||||| ||||| || | || || || || |||||||| | || |
Sbjct 1770840 AATCGTCGCTGAATGTAACCCGTCTCGGCGGTCTTGACGGCAGTATCAATCAATCCTTCT 1770781
Query 302650 CGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTC 302709
|| ||| |||| ||||||||| | | || ||| || || | | | | ||| ||
Sbjct 1770780 CGTCCAGCCATGGCATGGAAGTAGAATTCAGACGGGGTGAGACCTCTCAGATACGAGTTC 1770721
Query 302710 TCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTG 302769
|| ||||||||||| |||||||| |||| ||| |||||| || || || || || | |
Sbjct 1770720 TCCACGAAACCACGGGCCTCGGGTGAATAATCGTCCTTGGTGAAATGAGGAAGTGTTCGG 1770661
Query 302770 TTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTC---CCAGGCACGAA 302826
| || | ||| | || ||||| ||||| ||||| |||||||| ||||| |||
Sbjct 1770660 TACTTGAATCCGAAAGGAATACGTTTTCCCTCAACAACCTGCTGTCCGACCAGGGCCGA- 1770602
Query 302827 ATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866
||| || || || || | || |||||||| ||||
Sbjct 1770601 --CATTTGAGAGATGTTAATGGCAGAACCCTTGGATCCAG 1770564
>seq16
Length=460921
Score = 91.5 bits (100), Expect = 4e-13
Identities = 113/151 (75%), Gaps = 4/151 (3%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || ||||||||| ||||| || || || |||||||| ||||| ||| ||
Sbjct 262278 TGAGCAATGGTCATACGAGACGGAATGGCGTGAGGGTTGATGATAATGTCAGGTACCAAG 262219
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT-CAATAA-TGTTTCCAATAGTTCCCTTTT 251956
|| ||| ||||| ||||| || || | | | ||| || ||||| ||||||||||
Sbjct 262218 CCTTCACGGGTGAACGGCATGTC--TTCCGTACGGTAAGTGACACCAATGGTTCCCTTTT 262161
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||||| |||||| ||||||||
Sbjct 262160 GTCCGTGACGAGATGCGAACTTGTCACCAAT 262130
Score = 86.0 bits (94), Expect = 2e-11
Identities = 173/255 (68%), Gaps = 4/255 (2%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
||||||||||| | | || || ||||| ||| | || || || | || | | ||
Sbjct 262710 ATAAGACCACAGATCTCGCAGACGTGGACTCTGAATGCGTCCGACACCTCGAACAAACGC 262651
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| | |||||||| | ||||| ||||||||||||||||| ||||||
Sbjct 262650 TCCTTCAAGAATGCCGCGGCACCGTGAGCGATCATGCAATCACGCTCCATTTCTCCGAAA 262591
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA--G 251584
|| | |||||||| | || | ||||||| ||||||| | ||| |||| | || |
Sbjct 262590 CGCAAGCCACCATCTCTGGCACGACCCTCGACAGGCTG--GCGTGTCATTATCTGTACCG 262533
Query 251585 GACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG 251644
|||| || | | || ||| || | ||||| || |||||||||||| | |
Sbjct 262532 GACCACGGGCTCTGGCGTGGATCTTGTCGTCGACCATGTGACGCAGACGCTGGTAGTAGG 262473
Query 251645 CGGGACCGATGAAGA 251659
||| || | |||||
Sbjct 262472 TGGGTCCAAAGAAGA 262458
>seq1
Length=4509802
Score = 86.0 bits (94), Expect = 2e-11
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 289024 tttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083
||||| || | |||||| ||||| || |||||||| | ||| |||| | | || |||
Sbjct 1267086 TTTTTGCCGATAGCATCGATTTCATCGATGAAAATAATACAGGGAGCGCTCTTTCGCGCC 1267145
Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143
| || || | |||| || ||||| || || | |||||| |||| || || || ||
Sbjct 1267146 GTGGCGAAGAGGTCTCGAACTCGGGAAGCACCTACACCAACGAACATCTCCACGAACTCG 1267205
Query 289144 GAAGCGGATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
||| || ||| |||| ||| | || | ||| || || |||| | ||||||||
Sbjct 1267206 GAACCGCTTACGCTGAA-GAAAGGAACCCCGGATTCACCGGCAGTTGCCTTAGCCAGAAG 1267264
Query 289203 TGTCTTACCTGTTCCAGGTGGTCC 289226
|||||| || ||||| || |||||
Sbjct 1267265 TGTCTTGCCCGTTCCCGGGGGTCC 1267288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816902266469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |