Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq12 129 7e-24
seq17 100 3e-15
>seq12
Length=3698523
Score = 129 bits (142), Expect = 7e-24
Identities = 170/234 (73%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759
|| ||| | |||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct 322802 TAGTCGGCGACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATG 322743
Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819
| ||| ||||| | || |||| ||| ||| || || | | || || |||
Sbjct 322742 AAGTCGAAGGGGTTTGACGAACGGTAGACCTTGTCGTTGCCAAGGGCGACCAGGAGACGG 322683
Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GATGAGCGCCA 868877
||||| ||||||||||| ||||| |||||| | ||||||||||| || |||| | |
Sbjct 322682 TCGGCAACAAACTCGATATACTGCTTCATGAGATCCGCGTTCATGCCAAGAAGAGCACAA 322623
Query 868878 CCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931
|||| | ||| ||| || |||| ||||||| ||| || ||||||||||
Sbjct 322622 --GGCAAGGCTTCGGTCAAGAATTCTTGTTCGATCTTGACAGCGTCGACGATGA 322571
Score = 129 bits (142), Expect = 7e-24
Identities = 95/111 (86%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
|||||||||| ||||||||||| || || ||| | || ||||| | || ||||||||||
Sbjct 982732 CCAACTACCTTGACATCAAGCCCCTTCTGGATGTCGGTTGCAAAACCGTCGCCAACATGA 982791
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||| |||||||||||||||||||| || ||||||| | |||
Sbjct 982792 TCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACGTTCAACATCACGAACG 982842
Score = 122 bits (134), Expect = 1e-21
Identities = 145/195 (74%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||||||||||||| || | |||||| ||||| | ||||||||| || ||||||||
Sbjct 322497 ACCTTCGTCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCCGGGCATAAGACCGCGCTT 322438
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| | ||| ||||| | |||| || ||| ||||| ||||| |||||||| ||
Sbjct 322437 CTTCAACCAGAAGATAGATGCGAAAGCACCACTGAAGAAGATTCCCTCAACGGCGGCGAA 322378
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355
| | ||||| |||| ||| |||||| ||| | ||||| ||||||||||| ||
Sbjct 322377 GGCAATGAGACGCTGGGCGAAGGTG--GAG----TTCTTGTCGGCGATCCACTTCAGAGC 322324
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 322323 CCAGTCGGCCTTCTT 322309
>seq17
Length=408792
Score = 100 bits (110), Expect = 3e-15
Identities = 119/160 (74%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103
|| || || || || || || || || ||||| | ||||||||| || || |||
Sbjct 161998 GAAGATAGTATTGGTGGGACAGTCACCTGCGTCATCAGGAACGTGCCGAGTGGGCTGGGC 161939
Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163
||||| |||||||||||||| ||||||| | | || ||||||||| || || |||||
Sbjct 161938 GAGCCTTGCTTTGACAAGATGGAGGCCGAGTTGGCACACGCCATGATGAGCATACCGGCT 161879
Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTT-GCGGGTGCG 19202
|||||||| |||||| |||| || ||| |||| ||||
Sbjct 161878 ACCAAGGGCTTCGAGGTTGGATCTGGATTTGGCGGCTGCG 161839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136163606729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |