Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12 129 7e-24 seq17 100 3e-15 >seq12 Length=3698523 Score = 129 bits (142), Expect = 7e-24 Identities = 170/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || ||| | |||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct 322802 TAGTCGGCGACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATG 322743 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 | ||| ||||| | || |||| ||| ||| || || | | || || ||| Sbjct 322742 AAGTCGAAGGGGTTTGACGAACGGTAGACCTTGTCGTTGCCAAGGGCGACCAGGAGACGG 322683 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GATGAGCGCCA 868877 ||||| ||||||||||| ||||| |||||| | ||||||||||| || |||| | | Sbjct 322682 TCGGCAACAAACTCGATATACTGCTTCATGAGATCCGCGTTCATGCCAAGAAGAGCACAA 322623 Query 868878 CCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931 |||| | ||| ||| || |||| ||||||| ||| || |||||||||| Sbjct 322622 --GGCAAGGCTTCGGTCAAGAATTCTTGTTCGATCTTGACAGCGTCGACGATGA 322571 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||||||||| ||||||||||| || || ||| | || ||||| | || |||||||||| Sbjct 982732 CCAACTACCTTGACATCAAGCCCCTTCTGGATGTCGGTTGCAAAACCGTCGCCAACATGA 982791 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||| |||||||||||||||||||| || ||||||| | ||| Sbjct 982792 TCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACGTTCAACATCACGAACG 982842 Score = 122 bits (134), Expect = 1e-21 Identities = 145/195 (74%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||||||| || | |||||| ||||| | ||||||||| || |||||||| Sbjct 322497 ACCTTCGTCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCCGGGCATAAGACCGCGCTT 322438 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| | ||| ||||| | |||| || ||| ||||| ||||| |||||||| || Sbjct 322437 CTTCAACCAGAAGATAGATGCGAAAGCACCACTGAAGAAGATTCCCTCAACGGCGGCGAA 322378 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | ||||| |||| ||| |||||| ||| | ||||| ||||||||||| || Sbjct 322377 GGCAATGAGACGCTGGGCGAAGGTG--GAG----TTCTTGTCGGCGATCCACTTCAGAGC 322324 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 322323 CCAGTCGGCCTTCTT 322309 >seq17 Length=408792 Score = 100 bits (110), Expect = 3e-15 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 || || || || || || || || || ||||| | ||||||||| || || ||| Sbjct 161998 GAAGATAGTATTGGTGGGACAGTCACCTGCGTCATCAGGAACGTGCCGAGTGGGCTGGGC 161939 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||| |||||||||||||| ||||||| | | || ||||||||| || || ||||| Sbjct 161938 GAGCCTTGCTTTGACAAGATGGAGGCCGAGTTGGCACACGCCATGATGAGCATACCGGCT 161879 Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTT-GCGGGTGCG 19202 |||||||| |||||| |||| || ||| |||| |||| Sbjct 161878 ACCAAGGGCTTCGAGGTTGGATCTGGATTTGGCGGCTGCG 161839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136163606729