Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq37 109 5e-19 seq23 86.0 6e-12 >seq37 Length=2347807 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || ||||| || || || || ||||| || || | | Sbjct 2331335 GATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTC 2331276 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || |||||||| Sbjct 2331275 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCA 2331216 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | |||||||| || || || || ||||| | | |||| || || || Sbjct 2331215 GCAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAA 2331156 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 |||||||||||| ||||| || ||| Sbjct 2331155 CATTCAAAAGGAGTCGACCCTCCAC 2331131 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| ||||||| || || || || || ||||| ||||| || || || | Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| ||||| || || || || || || || || Sbjct 2331046 GATACCATTGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCAG 2330987 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| || || || || |||||| | | | | || || || ||| Sbjct 2330986 CAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAAC 2330927 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||| ||||| ||| | || | || | ||||| || Sbjct 2330926 ATTCAGAAAGAAAGCACACTTCACCTTGTCCTCCGTCTCCGCGGTGG 2330880 >seq23 Length=3455761 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || ||||| || || || || || | Sbjct 479585 ACCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 479526 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || |||||||| ||||| ||||| || || || || Sbjct 479525 AGCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGAC 479466 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||| || ||||| || ||||| |||||| | | | || || || Sbjct 479465 CAGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTAC 479406 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || || | ||| || || | || ||||| Sbjct 479405 AACATCCAGAAGGAGAGCACCCTCCATCTCGTGCTGAGACTCCGTGGAGG 479356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897391922360