Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 129 9e-24 seq1 129 9e-24 seq32 95.1 2e-13 >seq12 Length=3698523 Score = 129 bits (142), Expect = 9e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||| |||||||||||||| || ||| | || ||||| ||||| |||||| | | Sbjct 982732 CCAACTACCTTGACATCAAGCCCCTTCTGGATGTCGGTTGCAAAACCGTCGCCAACATGA 982791 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||||| |||||||| ||||||||||| || ||||||| | ||| Sbjct 982792 TCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACGTTCAACATCACGAACG 982842 Score = 114 bits (126), Expect = 2e-19 Identities = 176/249 (71%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||| ||| ||| | |||||| ||||||||||||||||||||| ||||| Sbjct 322817 ACACCAGCCTTCTGATAGTCGGCGACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCGAGC 322758 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012 ||||| |||||| | ||| ||||| | || ||||| ||| ||| || || Sbjct 322757 GAGATGTTCTCCATGAAGTCGAAGGGGTTTGACGAACGGTAGACCTTGTCGTTGCCAAGG 322698 Query 794013 GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATG 794072 | | || || |||||||| || || || || ||||| |||||| | ||||||||| Sbjct 322697 GCGACCAGGAGACGGTCGGCAACAAACTCGATATACTGCTTCATGAGATCCGCGTTCATG 322638 Query 794073 CC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 || || |||| | | |||| | ||| | | || |||| ||||||| ||| || | Sbjct 322637 CCAAGAAGAGCACAA--GGCAAGGCTTCGGTCAAGAATTCTTGTTCGATCTTGACAGCGT 322580 Query 794131 CGATGATGA 794139 ||| ||||| Sbjct 322579 CGACGATGA 322571 Score = 93.3 bits (102), Expect = 7e-13 Identities = 136/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||||||| || | |||||| |||| | ||||||||| || |||||||| Sbjct 322497 ACCTTCGTCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCCGGGCATAAGACCGCGCTT 322438 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||| ||||| | |||| || ||| ||||| ||||| |||||||| || Sbjct 322437 CTTCAACCAGAAGATAGATGCGAAAGCACCACTGAAGAAGATTCCCTCAACGGCGGCGAA 322378 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | | ||| |||| ||| || ||| | || | | ||||||||||| ||||| Sbjct 322377 GGCAATGAGACGCTGGGCGAAGGTG---GAGTTCTTGTCGGCGATCCACTTCAGAGCCCA 322321 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 322320 GTCGGCCTTCTT 322309 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| ||||||||| ||||| | |||||||||||| ||||| ||||| || || Sbjct 322198 GGCTCCTTGATGTAGGTGTCAATGAGCAACGAGTAGGTCTCGGAGTGAATGTTCTCCATC 322139 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 |||||||||||| || ||||| Sbjct 322138 ATGATCTGGAAGCCGTAGAAGCA 322116 >seq1 Length=4509802 Score = 129 bits (142), Expect = 9e-24 Identities = 173/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 2019196 TGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGG 2019255 |||| | ||||| |||||| | | |||||||| ||||| || || | || |||| | Sbjct 1519924 TGCCCGCTGGCCGACACAAGCTCGTGATCCTCGACGAGGCAGATAGCATGACATCGGGTG 1519865 Query 2019256 CCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGG 2019315 | ||||| |||||||| ||| ||||| | ||| ||||||| |||||||| || | | Sbjct 1519864 CGCAGCAAGCCCTCCGCCGGACAATGGAGATCTACTCCAACACTACGCGGTTCGCATTCG 1519805 Query 2019316 CCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCT 2019375 ||||||| ||| | | |||||||| | || ||| | |||||||||||||| | Sbjct 1519804 CCTGCAATCAGTCCAACAAGATCATCGAACCGCTGCAGTCGAGATGCGCCATCTTGCGAT 1519745 Query 2019376 TTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAA 2019435 ||| ||||| ||||| || || ||| | |||||| | |||| || || ||||| | Sbjct 1519744 ATGCCCGCCTGACCGATGCGCAAGTCGTCAAGCGTCTCCTGCAGATCATTGAAGCCGAGA 1519685 Query 2019436 A 2019436 | Sbjct 1519684 A 1519684 >seq32 Length=3118845 Score = 95.1 bits (104), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| || || || ||||||||| |||| || || ||| | | Sbjct 396802 GTACTTGGTGACTGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCGAGCTCACCGGGAAG 396743 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| || | |||||||||||| |||| Sbjct 396742 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 396711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916242464141243