Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq37 141 6e-29
seq23 138 7e-28
seq34 104 2e-17
>seq37
Length=2347807
Score = 141 bits (156), Expect = 6e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||||| || ||||||||||| ||||| || ||| |||| ||||
Sbjct 2330895 AGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCC 2330954
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| || || ||||||||| | || | |||||||| ||
Sbjct 2330955 TCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCT 2331014
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| || |||||| || | ||| ||||||
Sbjct 2331015 TGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTC 2331074
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||| || || || ||||||||||||
Sbjct 2331075 TTGCCAGTGAGAGTTTTAACGAAGATCTGCATG 2331107
Score = 118 bits (130), Expect = 7e-22
Identities = 157/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||||| || ||||||||||| ||||| || ||| |||| ||||
Sbjct 2330667 AGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 2330726
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| || || ||||| ||| | || | |||||||| ||
Sbjct 2330727 TCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCC 2330786
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || ||||||| || | |||||| || | ||| ||
Sbjct 2330787 TGGATCTTCGACTTCAC--AT--TATCGATAGTGTCCGACGACTCGACCTCTAGGGTGAT 2330842
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || |||||||| || || || |||||
Sbjct 2330843 AGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330878
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| |||||| |||||||| |||||||| | |||| | ||
Sbjct 2331123 AGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCC 2331182
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| || || ||||| || | || | |||||||||||
Sbjct 2331183 TCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCC 2331242
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | || ||||||
Sbjct 2331243 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTC 2331302
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || |||||||| || || |||||||||||
Sbjct 2331303 TTCCCGGTGAGGGTTTTCACGAAGATCTGCAT 2331334
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||||||||| ||||| ||||| ||||| || || |||| | ||
Sbjct 2330439 AGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCC 2330498
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||| || || || || |||||||| | || | |||||||| ||
Sbjct 2330499 TCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 2330558
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || ||||||| || | |||||| || | ||| ||
Sbjct 2330559 TGAATCTTCGACTTCAC--AT--TATCGATAGTGTCCGACGACTCGACTTCTAGGGTGAT 2330614
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || |||||||| || || || |||||
Sbjct 2330615 AGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
>seq23
Length=3455761
Score = 138 bits (152), Expect = 7e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || || | ||||||||||||||| ||||| ||||| || || |||| ||
Sbjct 479368 CTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCA 479427
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| |||||||| |||| ||| |||||||| | || | || ||||||
Sbjct 479428 TCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTG 479487
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || ||||| | || | || | | ||| || |||| ||| ||
Sbjct 479488 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATA 479547
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| |||||||||||||| || ||||||||||||
Sbjct 479548 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 479583
>seq34
Length=2752027
Score = 104 bits (114), Expect = 2e-17
Identities = 136/186 (73%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||||||||| ||||| || || | || |||| || || ||||| || |||||||
Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || ||||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 472478
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || | ||| || |||| ||| |||||||| ||||| ||||||||
Sbjct 472477 -TGTCGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 472419
Query 34964 ACAAAG 34969
|| |||
Sbjct 472418 ACGAAG 472413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692653132903
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |