Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq37 114 3e-20 >seq37 Length=2347807 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || ||||||||| || || || || || || | | || Sbjct 2330891 ACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCC 2330950 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || ||||| || |||||||||||||| | || || ||||| || || || ||||| Sbjct 2330951 ATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTT 2331010 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||||||||| | || || || ||||| |||||| | || || || | || || Sbjct 2331011 ATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAAT 2331070 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | || || || || |||||||| Sbjct 2331071 GGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106 Score = 107 bits (118), Expect = 4e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || ||||||||| || || || ||||| || | | || Sbjct 2330663 ACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCC 2330722 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || ||||| || ||||||||||| || | || ||||||||||| || || ||||| Sbjct 2330723 ATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTT 2330782 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||| | || ||||| || || || || | || || || | || || Sbjct 2330783 ATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGAT 2330842 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || | ||||| || || || |||||| Sbjct 2330843 AGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || || || || || || || || | | | | ||| Sbjct 2331120 CGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCG 2331179 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||| || ||||||||||| || | || ||||| || || || || ||||| Sbjct 2331180 TCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTG 2331239 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| | || || || || || || || || || || || | ||| || Sbjct 2331240 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATG 2331299 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | || || || || |||||||| Sbjct 2331300 GTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCAT 2331334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826734552543