Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq23 122 6e-23
seq37 93.3 3e-14
>seq23
Length=3455761
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||| | ||| || |||||||| || || |||||||| |||||||| ||||| | || ||
Sbjct 479373 CACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTC 479432
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || || ||||| |||||||| |||||||| || | || | ||||| |||||
Sbjct 479433 GAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTG 479492
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || || | ||| |||| ||||||||| || ||||| |||| ||||| || |
Sbjct 479493 GATCTTGGACTTGA-CATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCT 479551
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754
| || || | || || || ||||||||||| ||||
Sbjct 479552 TGCCCGTGAGGGTCTTCACGAAGATCTGCATGGTTG 479587
>seq37
Length=2347807
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||| || || ||||||||||| || |||||||| || ||||| ||||| |||| |||
Sbjct 2330442 ACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCC 2330501
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || |||||||||||||| | |||||||| || | || | || || || || |
Sbjct 2330502 AGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGA 2330561
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| ||| ||| |||| || | ||||| || || || || | ||||| || ||
Sbjct 2330562 ATCTTCGACTTC-ACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTT 2330620
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || || || |||||
Sbjct 2330621 GCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703851775040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |