Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 116 5e-20 >seq12 Length=3698523 Score = 116 bits (128), Expect = 5e-20 Identities = 207/299 (69%), Gaps = 5/299 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||| ||||||||| | |||| Sbjct 321902 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACC 321960 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| | | ||||| | | | || || ||| |||||| Sbjct 321961 TGTCCAAGGACATGCACGACTGGAACAACAAGATTAATGAAGATGAGAAGTTCTTCATCT 322020 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| | || || || ||| ||||| |||||||| || ||||||||||| || Sbjct 322021 CCCACATTCTTGCTTTCTTT-GCCGCGTCAGATGGCATTGTCAACGAGAACCTGGTCGAG 322079 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | || ||||| | || || || || | || ||||| ||||||||| Sbjct 322080 CGCTTCAGCGGCGAAGTCCAGATCCCCGAAGCTCGATGCTTCTACGGCTTCCAGATCATG 322139 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||| ||||| || ||||||||| | || || ||||||||| ||||||| || Sbjct 322140 ATGGAGAACATTCACTCCGAGACCTACTCGTTGCTCATTGACACCTACATCAAGGAGCC 322198 Score = 104 bits (114), Expect = 3e-16 Identities = 165/231 (71%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 1456524 TCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGC 1456583 |||||||||| || ||| ||||||| |||| || | | ||| | |||| | | || Sbjct 322571 TCATCGTCGACGCTGTCAAGATCGAACAAGAATTCTTGACCGAAGCCTTGCC--TTGTGC 322628 Query 1456584 TCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 || || ||||||||||| |||||| ||||| || || ||| || |||||||| Sbjct 322629 TCTTCTTGGCATGAACGCGGAT-CTCATGAAGCAGTATATCGAGTTT-GTTGCCGACCGT 322686 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 || || | || || ||| || | ||| |||||| || | ||||| ||| | || Sbjct 322687 CTCCTGGTCGCCCTTGGCAACG-ACAAGGTCTACCGTTCGTCAAACCCCTTCGACTTCAT 322745 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC 1456752 |||| |||||||||| ||||||||||||||||||||| ||||| || Sbjct 322746 GGAGAACATCTCGCTCGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTCGC 322796 Score = 96.9 bits (106), Expect = 5e-14 Identities = 140/193 (73%), Gaps = 10/193 (5%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179 || |||||||||||||| ||||||||||| ||||| | ||| || ||| ||| Sbjct 322309 AAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAA----CTCCAC-CTTCGCCC 322363 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 |||| ||| | | ||| ||||| || ||||| ||||| ||| || |||| | | Sbjct 322364 AGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTA 322423 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298 |||| ||| | ||||||||||| || |||||||| ||| |||| |||||| | || Sbjct 322424 TCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGG-CTTGACCTTTTCCAACGAGCTCATT 322482 Query 1456299 AGTCGCGACGAAG 1456311 ||||||||||| Sbjct 322483 TCTCGCGACGAAG 322495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807631281994