Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 5e-20
>seq12
Length=3698523
Score = 116 bits (128), Expect = 5e-20
Identities = 207/299 (69%), Gaps = 5/299 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| || || ||||| ||||||||| | ||||
Sbjct 321902 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACC 321960
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | |||| | | ||||| | | | || || ||| ||||||
Sbjct 321961 TGTCCAAGGACATGCACGACTGGAACAACAAGATTAATGAAGATGAGAAGTTCTTCATCT 322020
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| | || || || ||| ||||| |||||||| || ||||||||||| ||
Sbjct 322021 CCCACATTCTTGCTTTCTTT-GCCGCGTCAGATGGCATTGTCAACGAGAACCTGGTCGAG 322079
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | || ||||| | || || || || | || ||||| |||||||||
Sbjct 322080 CGCTTCAGCGGCGAAGTCCAGATCCCCGAAGCTCGATGCTTCTACGGCTTCCAGATCATG 322139
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|| || ||||| ||||| || ||||||||| | || || ||||||||| ||||||| ||
Sbjct 322140 ATGGAGAACATTCACTCCGAGACCTACTCGTTGCTCATTGACACCTACATCAAGGAGCC 322198
Score = 104 bits (114), Expect = 3e-16
Identities = 165/231 (71%), Gaps = 7/231 (3%)
Strand=Plus/Plus
Query 1456524 TCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGC 1456583
|||||||||| || ||| ||||||| |||| || | | ||| | |||| | | ||
Sbjct 322571 TCATCGTCGACGCTGTCAAGATCGAACAAGAATTCTTGACCGAAGCCTTGCC--TTGTGC 322628
Query 1456584 TCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641
|| || ||||||||||| |||||| ||||| || || ||| || ||||||||
Sbjct 322629 TCTTCTTGGCATGAACGCGGAT-CTCATGAAGCAGTATATCGAGTTT-GTTGCCGACCGT 322686
Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701
|| || | || || ||| || | ||| |||||| || | ||||| ||| | ||
Sbjct 322687 CTCCTGGTCGCCCTTGGCAACG-ACAAGGTCTACCGTTCGTCAAACCCCTTCGACTTCAT 322745
Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC 1456752
|||| |||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 322746 GGAGAACATCTCGCTCGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTCGC 322796
Score = 96.9 bits (106), Expect = 5e-14
Identities = 140/193 (73%), Gaps = 10/193 (5%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||||||||| ||||||||||| ||||| | ||| || ||| |||
Sbjct 322309 AAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAA----CTCCAC-CTTCGCCC 322363
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
|||| ||| | | ||| ||||| || ||||| ||||| ||| || |||| | |
Sbjct 322364 AGCGTCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTA 322423
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298
|||| ||| | ||||||||||| || |||||||| ||| |||| |||||| | ||
Sbjct 322424 TCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGG-CTTGACCTTTTCCAACGAGCTCATT 322482
Query 1456299 AGTCGCGACGAAG 1456311
|||||||||||
Sbjct 322483 TCTCGCGACGAAG 322495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177807631281994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |