Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq23 134 1e-26
seq37 107 2e-18
seq34 96.9 3e-15
>seq23
Length=3455761
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | |||| ||| | ||| | || |||||||| || |||||||| ||||
Sbjct 479356 CCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 479415
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || ||||| ||||||||||||| ||
Sbjct 479416 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGG 479475
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||||||| |||||| ||| | | | | | ||||||||||| ||||||
Sbjct 479476 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACC 479535
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || ||||| | || ||||| || ||||||||
Sbjct 479536 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582
>seq37
Length=2347807
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||||||||||||||| || | ||| || || |||| || || ||||| || |||||
Sbjct 2331143 CTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 2331202
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||| || | || | || |||||||||| |||||| ||| | ||
Sbjct 2331203 GATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 2331261
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || || ||||| | ||||| || || || || | |||||||
Sbjct 2331262 TGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCA 2331321
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 2331322 CGAAGATCTGCAT 2331334
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||| || | || ||||| || || |||||||| || | | || || |||| |||
Sbjct 2330442 ACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCC 2330501
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || ||||| || | ||||||||||| | ||||| || |||||| |||
Sbjct 2330502 AGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGA 2330561
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707
||||| ||||| | | | | ||||| ||| || || || | ||||| || ||
Sbjct 2330562 ATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTTG 2330621
Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || | || || || || || |||||
Sbjct 2330622 CCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
Score = 89.7 bits (98), Expect = 5e-13
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| || || || ||||||||||| || | | ||| || | || || || ||||| ||
Sbjct 2330682 GTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCA 2330741
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| || | |||||||| || | ||||| || |||||| ||| |||||| ||||
Sbjct 2330742 GCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTC 2330801
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719
| | | | | ||||| ||| || ||||| | ||||| || || || || | ||
Sbjct 2330802 ACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTC 2330861
Query 35720 TTCACAAATATCTGCATTC 35738
|| || || || |||||||
Sbjct 2330862 TTGACGAAAATTTGCATTC 2330880
>seq34
Length=2752027
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| ||||||||||| |||| | || || | || || |||||||| || || || |
Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||| | |||| || |||||||||| |||||| ||| | | |
Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | || ||| || |||||||| | ||||| || || ||||||| || ||||| |
Sbjct 472474 CGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 472415
Query 35727 A 35727
|
Sbjct 472414 A 472414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793391507960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |