Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq23 134 1e-26 seq37 107 2e-18 seq34 96.9 3e-15 >seq23 Length=3455761 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| ||| | ||| | || |||||||| || |||||||| |||| Sbjct 479356 CCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 479415 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| ||||||||||||| || Sbjct 479416 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGG 479475 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| |||||| ||| | | | | | ||||||||||| |||||| Sbjct 479476 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACC 479535 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | || ||||| || |||||||| Sbjct 479536 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 >seq37 Length=2347807 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| || | ||| || || |||| || || ||||| || ||||| Sbjct 2331143 CTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 2331202 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | || | || |||||||||| |||||| ||| | || Sbjct 2331203 GATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 2331261 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||||| || || || || | ||||||| Sbjct 2331262 TGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCA 2331321 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2331322 CGAAGATCTGCAT 2331334 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | || ||||| || || |||||||| || | | || || |||| ||| Sbjct 2330442 ACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCC 2330501 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| || | ||||||||||| | ||||| || |||||| ||| Sbjct 2330502 AGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGA 2330561 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | | ||||| ||| || || || | ||||| || || Sbjct 2330562 ATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGGTGATAGTCTTG 2330621 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || || ||||| Sbjct 2330622 CCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || || || || ||||||||||| || | | ||| || | || || || ||||| || Sbjct 2330682 GTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCA 2330741 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | |||||||| || | ||||| || |||||| ||| |||||| |||| Sbjct 2330742 GCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTC 2330801 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| ||| || ||||| | ||||| || || || || | || Sbjct 2330802 ACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTC 2330861 Query 35720 TTCACAAATATCTGCATTC 35738 || || || || ||||||| Sbjct 2330862 TTGACGAAAATTTGCATTC 2330880 >seq34 Length=2752027 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| ||||||||||| |||| | || || | || || |||||||| || || || | Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||| | |||| || |||||||||| |||||| ||| | | | Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | || ||| || |||||||| | ||||| || || ||||||| || ||||| | Sbjct 472474 CGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 472415 Query 35727 A 35727 | Sbjct 472414 A 472414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793391507960