Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq12 91.5 5e-13
seq17 84.2 7e-11
>seq12
Length=3698523
Score = 91.5 bits (100), Expect = 5e-13
Identities = 136/189 (72%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 443674 AGTGGCTCGAACGAGAAAATCTC-AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTC 443732
||||| ||| ||| || | ||| | ||||| | |||| || | || || || | ||
Sbjct 322331 AGTGGATCGC-CGACAAGAACTCCACCTTCGCCCAGCGTCTCATTGCCTTCGCCGCCGTT 322389
Query 443733 GAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACT 443792
|| ||| | || || || || ||||| || || |||||||||||||| ||||| || ||
Sbjct 322390 GAGGGAATCTTCTTCAGTGGT-GCTTTCGCATCTATCTTCTGGTTGAAGAAGCGCGGTCT 322448
Query 443793 TATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGA 443852
||||| ||| |||||||| ||||| || || ||| ||||| ||| |||| |||
Sbjct 322449 TATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCGCGACGAAGGTCTGCACACCGA 322508
Query 443853 CTTCGCCTG 443861
|| |||||
Sbjct 322509 TTTTGCCTG 322517
>seq17
Length=408792
Score = 84.2 bits (92), Expect = 7e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||||||| | || ||| | ||||| ||||||||| || | ||||||||||| || ||
Sbjct 106082 CGGCATTGTCCCCATGCTGCGTGTCTTCAACAACACTGCGAGATACGTCGATCAGGGTGG 106023
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
| ||| || || || || ||| | |||||||| ||||| |||||||| ||
Sbjct 106022 CAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAGCCATGGCACGCGGA 105972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335247029465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |