Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq17 244 1e-59 >seq17 Length=408792 Score = 244 bits (270), Expect = 1e-59 Identities = 1060/1654 (64%), Gaps = 58/1654 (4%) Strand=Plus/Plus Query 110366 AGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGC 110425 || |||||||| || ||||| ||||| | ||||| || | ||||| | || | Sbjct 104676 AGGTAGTACATGCCTGTCTTCAGTCCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATC 104735 Query 110426 TTGGACATCGTTGGACTTTCCATGAAGAGGTTCATA--CTTTGACTTTGGTCAATGAAGC 110483 ||| ||| || || || |||| || ||||| | || |||| ||||||||||| Sbjct 104736 TTGCCCATGGTGGGGTCTTTCATGTGGATGTTCAGAGACTGGGACT--GGTCAATGAAGG 104793 Query 110484 GCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA-ATTTCCCAAACTGTGCGA 110542 || || | || ||||| | || ||| | || | | | ||||||||||| || Sbjct 104794 CGCCACGATCGGCGGCCATCTGAACGACGGTCCTC-TGTGAGATTTCCCAAACGGTCTTG 104852 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 || || ||||| || | || |||| | ||| ||||| | |||||| | | Sbjct 104853 TACAGGGCCTTGACTTCGGCGGGAATATTGGGGATGTTCTGAACGGAACCGTTCTCGGCA 104912 Query 110603 ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGG 110662 | || ||| |||||| | | ||||||||||| || | ||||| |||| ||| Sbjct 104913 ATAATACGATTCTTCATGTTGTCAGACCAGAGACCCATGTCGACCAGGTCCTTGAGGAGC 104972 Query 110663 TGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTG 110722 |||||||| || || || || || | | ||| ||||| | ||| Sbjct 104973 CAGGGGTTGACAACCTGGAAATCGCCAGCCAGAACACGACGAGAGTAAATGTTGGACGTG 105032 Query 110723 TATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 110782 || || || ||||| ||||| || |||| ||| || | |||||| || || ||||| || Sbjct 105033 TAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGAGAGGTGGAAGCAGTAGGCATGGGC 105092 Query 110783 GCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGAT----GCGTTCCTTGAGAAC--A 110836 |||||||| | ||||| |||| ||| | |||||||| || ||| ||| | | Sbjct 105093 GCCATCAACAAGCTGTTGCGAATACCATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAA 105152 Query 110837 TCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGG 110896 |||||| || | || | || | || |||| |||||||| |||| || | || | | Sbjct 105153 TCCCAG----AGGTCAGAT-GGAGTAACGTTCC-ACATGTCATACTGGAGGATACCCTTG 105206 Query 110897 GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAA-TTCACAGCT 110955 || | ||||| || || |||| |||| ||| || ||| || | |||| | Sbjct 105207 GAGACAGGAGAGCCTTCGTAGGTGGAGTAGGGACCCTGCTCTTTGGCGAGGTTCATGGAG 105266 Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 111015 | || | | | || || || | ||| || ||||| | |||| || |||| || Sbjct 105267 GCCGTCAATGCA-GCATGGTAGAGGGTCTCGAAGATCTGCTTGTTCAGCTGTCTGGCCTC 105325 Query 111016 ATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACA 111070 ||| || || |||| || | || ||| | || || ||||| || ||| Sbjct 105326 TGGTGACTCGAAGGGCATGCGGAGAGCCAAGAAAG-----CGTCAGCAAGACCCTGGACA 105380 Query 111071 CCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAA 111127 || | ||||| ||||| |||||||||||| || || || |||| || || || Sbjct 105381 CCAAGACCAACAGGTCGGTGTCGCATATTGCTGTTCCGTGC---CTCAGGTACAGGGTAG 105437 Query 111128 AAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGT 111187 || ||| || | ||| ||||| ||| | || ||||| |||||||| Sbjct 105438 TGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCTCATGAAGC 105497 Query 111188 TTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCC 111247 || | | | ||| | |||| | | | || || || || | || || |||||| Sbjct 105498 TTCTGAAAGTCATACGTGCCCGAGTTGTAATCAACGAACGAGGGCAAAGCCATGGATGCC 105557 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 | ||||| ||||| |||||| | | |||||| | || ||||| || | ||| Sbjct 105558 AGGTTGCACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTGTGCAAAGATTG 105617 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 || || || || || | ||||| ||||| ||||| |||||| |||||||||| Sbjct 105618 GAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAG 105677 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGC 111426 ||||| | || | || ||||| ||||| | | ||| || || | ||| | | || | Sbjct 105678 AGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGG 105737 Query 111427 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 | || | || | ||| | |||||||| |||||||| || ||| || || || || Sbjct 105738 GCCTTG----ATCGACTTGCCGCGTCCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAA 105793 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 111546 ||| || || | || | ||||| || || | || || | | || ||| | Sbjct 105794 CTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGTCCAGTC 105853 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC--ACAGGGATGAAAAGAGA 111604 || | ||| || ||||||||||| || || ||||||| | || || |||| ||| Sbjct 105854 GCCGTTTCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGAGGAAA--AGA 105911 Query 111605 TCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 111663 || | | ||| || | || || | || ||||| || | ||||| ||||| | || Sbjct 105912 TCGCGAGCACGGA-CTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAACTCGAAGAC 105970 Query 111664 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGC 111717 ||||||||||||||||||||| |||| |||| | || ||||| ||| | Sbjct 105971 ATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACC---GGGACGCTTGTTGCCACC 106027 Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777 |||| || || | ||| ||| ||| || || || ||||| || | ||| || | ||| Sbjct 106028 CTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGCATGGGGACAATGCCGTTTGA 106087 Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 111837 | || || || || ||| ||| | | || | | ||| | | | || Sbjct 106088 TGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGAATGCGATGAACATTGAGGCC 106147 Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897 ||| || || ||| ||||||||| ||||| | | || || |||||||||| | Sbjct 106148 AATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATAGATACCCTC 106207 Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTAC 111956 ||| ||||||||| || ||| || ||||| |||| || || || || |||| Sbjct 106208 GATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTTG-GGCCTGAGGAGTAC 106266 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 111990 ||||||||||||| || || | ||| || |||| Sbjct 106267 CAGCATTGAAGAGTGTGGGAGATGCATGTGTGAA 106300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031709535200