Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq17 178 2e-39 seq12 98.7 1e-15 >seq17 Length=408792 Score = 178 bits (196), Expect = 2e-39 Identities = 1029/1628 (63%), Gaps = 36/1628 (2%) Strand=Plus/Plus Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 117899 ||||||||||| || ||||| || || |||||||| | | ||||| || | | Sbjct 104676 AGGTAGTACATGCCTGTCTTCAGTCCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATC 104735 Query 117900 TTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 ||| | ||| || || |||| || ||||| | ||||| || || |||||| Sbjct 104736 TTGCCCATGGTGGGGTCTTTCATGTGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCG 104795 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019 || ||||| || ||||| | || || | || ||||||||| || ||| |||| Sbjct 104796 CCACGATCGGCGGCCATCTGAACGACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTAC 104855 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 ||| ||| | || | || |||| ||| || || | ||| ||| || | | Sbjct 104856 AGGGCCTTGACTTCGGCGGGAATATTGGGGATGTTCTGAACGGA---ACCGTTCTCGGCA 104912 Query 118080 ATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136 || | ||| |||||| | | ||||||||||| || | || |||| | ||| Sbjct 104913 ATAATACGATTCTTCATGTTGTCAGACCAGAGACCCATGTCGACCAGGTCCTTGAGGAGC 104972 Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGT 118195 |||||||| || || || || || || | ||| || || |||| ||| Sbjct 104973 CAGGGGTTGACAACCTGGAAATCGCCAGCCAGAACACGACG-AGAGTAAATGTTGGACGT 105031 Query 118196 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGG 118255 ||| ||||| |||||||||||||| |||| ||| || | ||||| || || |||||||| Sbjct 105032 GTAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGAGAGGTGGAAGCAGTAGGCATGGG 105091 Query 118256 TGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCA 118315 ||||| | | |||||| || | ||| | |||| | || | | || || | ||||| Sbjct 105092 CGCCATCAACAAGCTGTTGCGAATACCATGTTCCTTGATCTGAGCTTTCAGTGACTCCCA 105151 Query 118316 GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGC 118375 || || | || | | |||||| ||| ||||||||||||| | ||| | Sbjct 105152 ATCCCAGAGGTCAGATGGAGTAACGTTCCACATGTCATACTGGAGGATACCCTTGGAGAC 105211 Query 118376 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA-TTC--GGAGCTCGC 118432 || || || || | || || || |||| | | || | ||| |||| || Sbjct 105212 AGGAGAGCCTTCGTAGGTGGAGTAGGGACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGT 105271 Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGT 118491 | | || || || || | || || || || | |||| || || |||||| Sbjct 105272 C---AATGCAGCATGGTAGAGGGTCTCGAAGATCTGCTTGTTCAGCTGTCT-GGCCTCTG 105327 Query 118492 CGGAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 || || || | | ||| | || ||| | || || ||||| |||||||| || Sbjct 105328 GTGACTCGAAGGGCATGCGGAGAGCCAAGAAAG-CGTCAGCAAGACCCTGGACACCAAGA 105386 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTC 118607 |||| || || |||| |||||| ||||| || ||| || || || || Sbjct 105387 CCAACAGGTCGGTGTCGCATATTGCTGTTCCGTGC---CTCAGGTACAGGGTAGTGGTTG 105443 Query 118608 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 118667 ||||||| | | || ||||| || |||| ||||| ||||||||||| | Sbjct 105444 ACGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCTCATGAAGCTTCTGA 105503 Query 118668 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 118727 | ||| | ||| | | | || || || || | || || || ||||| || Sbjct 105504 AAGTCATACGTGCCCGAGTTGTAATCAACGAACGAGGGCAAAGCCATGGATGCCAGGTTG 105563 Query 118728 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTC 118787 ||||||| |||||| | | |||||| || || || ||||| | || || || Sbjct 105564 CACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTGTGCAAAGATTGGAGCTG 105623 Query 118788 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 118847 |||||||| | |||||| || || ||| ||| || ||||||||| ||||| Sbjct 105624 CGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATA 105683 Query 118848 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGG 118906 | || | || ||||| || || | || ||| || || | ||||| | || | || | Sbjct 105684 AAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTG 105743 Query 118907 CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 118966 | | ||| | || ||||| ||||||| || ||| || || || ||||| || Sbjct 105744 ATC----GACTTGCCGCGTCCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATC 105799 Query 118967 ACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACC 119026 || | | || | || || || || || ||||| | | || ||| | || Sbjct 105800 GCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTT 105859 Query 119027 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 119086 ||| || |||||||||||||| || || ||||| || || ||| ||||| ||| Sbjct 105860 TCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGAGGAAAAGATCGCGAGC 105919 Query 119087 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 119146 || |||| || | || || || ||| | || | ||| || | || ||||||||| Sbjct 105920 ACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAACTCGAAGACATCCGCGTG 105979 Query 119147 CCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATA 119203 ||| || || ||||| | |||| | || ||| ||| |||| | || || Sbjct 105980 CCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGATCGACGTA 106039 Query 119204 CCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT 119263 ||||||||| ||| || ||||| ||||| || | || || | ||| || || || Sbjct 106040 TCTCGCAGTGTTGTTGAAGACACGCAGCATGGGGACAATGCCGTTTGATGTTCCGTTCGT 106099 Query 119264 CCCCCGAATACGAGACTTATTGGCTCTGACATCG-TGGATGTGCATACCAATACCCCCTG 119322 || ||| ||| | | || | || || || | | | ||||| || |||| Sbjct 106100 GCCAGCAATGTAAGAACCAGTCGCAC-GAATGCGATGAACATTGAGGCCAATGCCACCTG 106158 Query 119323 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCAC 119382 || ||||||||| || || | | || || | ||||| || ||||| ||| Sbjct 106159 CCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCATAGATACCCTCGATGCTGTCCT 106218 Query 119383 CCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAG 119441 |||| | ||| || |||||| |||| ||| |||||| || |||||||| |||||| Sbjct 106219 CCTTCATGTCGACCAGAAAGCAGGAAGACAGTTG-GGCCTGAGGAGTACCAGCATTGAAG 106277 Query 119442 AGAGTTGG 119449 || || || Sbjct 106278 AGTGTGGG 106285 >seq12 Length=3698523 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| ||||| ||||| || || ||||| || || || ||| || || Sbjct 322515 GGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAAAAGGTCAAGCC 322456 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| ||||| ||||||||||||||||| || | || | ||| ||||||||| Sbjct 322455 GGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCACTGAAGAAGAT 322396 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA 130194 ||||| || ||||| |||| |||||||| || |||| | | ||| | | Sbjct 322395 TCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTCTTGTCGGCGAT 322336 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTT 130221 |||||||| ||||| | ||||| || Sbjct 322335 CCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434913973720