Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq17 230 3e-55 seq12 91.5 2e-13 >seq17 Length=408792 Score = 230 bits (254), Expect = 3e-55 Identities = 1054/1646 (64%), Gaps = 42/1646 (3%) Strand=Plus/Minus Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| || ||| | || || ||||||||||||||||| || ||||| |||| Sbjct 106300 TTCACACATGCATCTCCCACACTCTTCAATGCTGGTACTCCTCAGGCCCAACTGTCTTCC 106241 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 ||||| || ||| || ||||||||| ||| | |||||||||| || || | | Sbjct 106240 TGCTTTCTGGTCGACATGAAGGAGGACAGCATCGAGGGTATCTATGACACCCTGAAGACC 106181 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| ||||||||| ||| || || ||||| | | | ||| | | || Sbjct 106180 TGTGCCATGATCTCAAAGATGGCAGGTGGCATTGGCCTCAATGTTCATCGCATTCGTGCG 106121 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 104554 | | ||| ||| || || || || |||| | || ||| | || ||||| || Sbjct 106120 ACTGGTTCTTACATTGCTGGCACGAACGGAACATCAAACGGCATTGTCCCCATGCTGCGT 106061 Query 104555 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCT 104608 || || ||| ||| ||| | || || |||| | ||| ||||| || | Sbjct 106060 GTCTTCAACAACACTGCGAGATACGTCGATCAGGGTGGCAACAAGCGTCCC---GGTGCC 106004 Query 104609 ATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 104668 |||| |||| ||||||||||||||||||||| || | ||||| ||||| | ||| Sbjct 106003 TTCGCTATCTACCTTGAGCCATGGCACGCGGATGTCTTCGAGTTTCTTGATCTCCGTAAG 105944 Query 104669 AACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727 ||||| || | ||||| | || ||| |||||||| ||| |||||| |||||||| || Sbjct 105943 AACCACGGCAAGGAGGAAGTCCG-TGCTCGCGATCTTTTCCTCGCTCTTTGGATTCCTGA 105885 Query 104728 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGC 104787 ||||||||||||| |||| ||| | ||| | ||| || | | || || | || Sbjct 105884 TCTCTTCATGAAGCGAGTCGAGAGAAACGGCGACTGGACTTTAATGTGCCCCAATGAGTG 105825 Query 104788 ACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGA 104847 |||||||| | |||| | || || ||||| || || || ||| || ||||||| Sbjct 105824 CCCTGGTCTGGCTGATGTCTACGGCGATGAGTTCGAGGCTCTGTACGAGAAATACGAGGC 105765 Query 104848 AGAAGGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAG 104905 || || || ||| | | ||| | || | || | | ||| | || || ||| || Sbjct 105764 CGAGGGACGCGGCAAGT-CGA----TCAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAG 105710 Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965 | || ||||||||||||| || | ||||| ||||| || ||| |||| ||||| Sbjct 105709 GCGCAGACCGAGACTGGTAACCCTTTTATGCTCTACAAGGATCACTGCAACCGCAAGAGC 105650 Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 || || ||||| | || ||| || |||||||| || ||||| ||| | || | Sbjct 105649 AACCAGAAGAACCTTGGCACCATCCGCAGCTCCAATCTTTGCACAGAGATCATCGAGTAC 105590 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 105085 | |||||| |||||||| ||||| ||||| || ||| | ||| || || Sbjct 105589 TGCGCTCCTGATGAGGTTGCTGTGTGCAACCTGGCATCCATGGCTTTGCCCTCGTTCGTT 105530 Query 105086 GATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACC 105145 ||| | | || | ||| | | | || || || || || || | || Sbjct 105529 GATTACAACTCGGGCACGTATGACTTTCAGAAGCTTCATGAGGTCACACAGGTCGTTGTT 105470 Query 105146 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAA 105202 || || |||| |||| || || ||||| || |||| || || || Sbjct 105469 CGCAATCTGAACAAGATTATCGACGTCAACCACTACCCTGTACCTGAG---GCACGGAAC 105413 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262 |||||| ||||||| || ||||||| ||||| |||||||| || || | ||| || Sbjct 105412 AGCAATATGCGACACCGACCTGTTGGTCTTGGTGTCCAGGGTCTTGCTGACGCTTTC-TT 105354 Query 105263 CTTTGTCGCCACG-CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGA 105321 | || || | | || || || || || | | | || || || || || Sbjct 105353 GGCTCTCCGCATGCCCTTCGAGTCACCAGAGGCCAGACAGCTGAACAAGCAGATCTTCGA 105294 Query 105322 GACCATGTATCACGCCGCTCTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCA 105379 |||| | || || || || |||| | | | || | | || | | | ||||| Sbjct 105293 GACCCTCTACCATGCTGC-ATTGACG-GCCTCCATGAACCTCGCCAAAGAGCAGGGTCCC 105236 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGA 105438 || |||| || || ||||| | || |||||| | || || | ||| |||| ||| Sbjct 105235 TACTCCACCTACGAAGGCTCTCCTGTCTC-CAAGGGTATCCTCCAGTATGACATGT-GGA 105178 Query 105439 AGGTGAGACCAAGCT--TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAG 105496 | || | || | || | || || ||||| | || || | | |||||||| | Sbjct 105177 ACGTTACTCC-ATCTGACCTCTGGGATTGGGAGTCACTGAAAGCTCAGATCAAGGAACAT 105119 Query 105497 GGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTG 105556 ||| |||| ||||| | | ||||| || ||||| || || |||||| | || ||| || Sbjct 105118 GGTATTCGCAACAGCTTGTTGATGGCGCCCATGCCTACTGCTTCCACCTCTCAGATCCTG 105059 Query 105557 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGC 105615 || || ||||| ||||| || ||||||||| | ||||| || ||| | | || || Sbjct 105058 GGCAACAATGAGTGCTTCGAGCCCTACACGTCCAACATTTACTCT-CGTCGTGTTCTGGC 105000 Query 105616 GGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTG 105675 || || || | |||||||| ||| | | ||||| || || |||||||| Sbjct 104999 TGGCGATTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGACCTGGTCGACATGGGTCTCTG 104940 Query 105676 GTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGA 105735 ||| | | |||||| ||| || | | | |||||| |||| || || | Sbjct 104939 GTCTGACAACATGAAGAATCGTATTATTGCCGAGAACGGTTCCGTTCAGAACATCCCCAA 104880 Query 105736 TATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGT 105795 |||||| ||| | ||| ||||| || |||||||||||| || | || Sbjct 104879 TATTCCCGCCGAAGTCAAGGCCCTGTACAAGACCGTTTGGGAAATCTCACAGAGGACCGT 104820 Query 105796 CATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAG--TATGAATCTC 105853 | || | |||||||| |||||||| ||||||||| | |||| || | |||| || Sbjct 104819 CGTTCAGATGGCCGCCGATCGTGGCGCCTTCATTGACC--AGTCCCAGTCTCTGAACATC 104762 Query 105854 TTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 105913 |||| || || || ||| |||| || | |||||| | | | |||||| Sbjct 104761 CACATGAAAGACCCCACCATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTT 104702 Query 105914 GGTCTCAAAACGGGGATGTATTACCT 105939 || || || || || ||||| ||||| Sbjct 104701 GGACTGAAGACAGGCATGTACTACCT 104676 >seq12 Length=3698523 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCG 94808 ||||| || || |||||| |||||||| | | |||| | | |||| || |||| Sbjct 322309 AAGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAACTCCA-CCTTCGCCCAGCG 322367 Query 94809 ACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTA 94868 ||| | || || || |||||||| ||||||||| |||| | ||| |||| | Sbjct 322368 TCTCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTT 322427 Query 94869 TTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCG 94928 ||| | |||||||| ||||| ||||| || | ||| ||||||||||| || ||||| Sbjct 322428 CTGGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCG 322487 Query 94929 TGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| || || ||| || ||||| Sbjct 322488 CGACGAAGGTCTGCACACCGATTTTGC 322514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260530241880