Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq35 244 3e-59 seq37 147 7e-30 seq23 84.2 7e-11 >seq35 Length=2561820 Score = 244 bits (270), Expect = 3e-59 Identities = 903/1409 (64%), Gaps = 8/1409 (1%) Strand=Plus/Plus Query 349260 TAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG 349319 ||||||| ||||| || || ||||| ||| | || || || || | ||| || || |||| Sbjct 584686 TAGAAATCATTGCCAACGACCAAGGCAACCGTACCACACCCTCCTTCGTCGCTTTCACCG 584745 Query 349320 AAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATA 349379 | || |||||| |||| || ||| | || || || |||| || || || ||| | Sbjct 584746 ACACGGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCCATGAACCCGTCAAACA 584805 Query 349380 CGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTG 349439 |||| || ||||||||||| || || || | | || | ||| | || | | Sbjct 584806 CGGTCTTCGATGCTAAGCGTCTGATCGGCCGCAAGTTCGCCGACCAGGAGGTCCAGGCCG 584865 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | | || || || || || | ||| | | | ||| || ||| || | || |||| Sbjct 584866 ACATGAAGCACTTCCCCTTCAAGGTTAT-CGACAAG--GGCTCTAAGCCTGTGATCGAGG 584922 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAG 349559 | ||||| || || || || || || |||||| || ||||| || ||||| | Sbjct 584923 TCGAATACAAGGGAGAGACTAAGCAGTTCACACCCGAGGAGATTTCCTCTATGGTGCTGA 584982 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 | || ||| || | ||| || |||||| | |||| || || | | || || || | Sbjct 584983 TCAAGATGCGCGAGACTGCCGAGGCATATCTTGGTGGCACTGTCAACAACGCCGTCATCA 585042 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 |||| || || || || || ||| |||||||| || || || ||||| || ||| Sbjct 585043 CTGTCCCTGCTTACTTCAACGATTCCCAGCGTCAAGCTACCAAGGATGCGGGTCTCATCT 585102 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 |||| | |||||||| |||| || || |||||||| || || || ||||| || || | Sbjct 585103 CGGGCCTGAATGTTCTCCGAATTATCAACGAACCCACCGCCGCTGCCATTGCCTACGGTC 585162 Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 | || || | | || || ||| | ||||| || || || ||||||||||| | Sbjct 585163 TCGACAAGAAGGTCGAGGGTGAGCGAAACGTCCTTATCTTCGACTTGGGTGGTGGTACCT 585222 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || || || || |||| ||||| || || || ||||| | ||||| |||| Sbjct 585223 TCGATGTCTCGCTCCTGACCATTGAGGAGGGTATCTTCGAGGTTAAGTCCACTGCCGGTG 585282 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAAT 349919 | || || | ||||| || || || || || ||||||||| || ||||| || || | Sbjct 585283 ACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTTGTCAACGAGT 585342 Query 349920 TTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAA 349979 | |||||| || || | ||| | || | | || | || || || | | Sbjct 585343 TCAAGCGTAAACACAAGAAGGATCTATCCTCCAACGCACGTGCTCTCCGCCGTCTCCGCA 585402 Query 349980 CTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTG 350039 |||| || || || || ||||| | | || || | | || ||||| ||||| || | Sbjct 585403 CTGCTTGCGAGCGAGCCAAGCGCACTCTTTCCTCGTCGGCTCAGACCTCAATTGAGATCG 585462 Query 350040 ATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAA 350098 | || ||| | || || || |||| | || || || ||||| || ||||| || Sbjct 585463 ACTC-GTTGTTCGAAGGTGTGGACTTCTACACTTCCATCACGCGTGCCCGATTTGAGGAG 585521 Query 350099 TTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCA 350158 | || ||| || || || | || | | ||||| || || || ||||| Sbjct 585522 CTGTGCCAGGACCTCTTCCGATCCACCCTCCAGCCTGTTGATCGCGTCTTGGCCGATGCC 585581 Query 350159 AAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCA 350218 || || ||| || | | || | || | || |||||||| || |||||||| Sbjct 585582 AAGATTGACAAGTCCCAAGTCCACGAGATCGTCCTGGTCGGTGGTTCCACGCGTATTCCC 585641 Query 350219 AAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAAT 350278 || || || | | | || | || || ||||| || || | || || || Sbjct 585642 CGTGTCCAGAAGCTTATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCCATCAAC 585701 Query 350279 CCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAG 350338 || ||||| |||||||| ||||||||||| || || || |||| | |||| ||| Sbjct 585702 CCCGATGAGGCTGTTGCCTATGGTGCTGCCGTCCAAGCTGCTATCCTTAGTGGAGATACT 585761 Query 350339 AGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTA 350395 || || || | | || | | || || ||||| | || || || || || | Sbjct 585762 AGCTCCAAGTCGACCAACGAGATTCTGCTTCTCGATGTTGCGCCGCTGTCTCTCGGTATC 585821 Query 350396 GAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAA 350455 || || |||||| | ||||| || ||||| | || | || | || || || Sbjct 585822 GAGACCGCTGGTGGCATGATGACCAAGCTCATTCCCCGCAACACCACCATCCCCACCAAG 585881 Query 350456 AAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTT 350515 |||||| | ||| ||||| || | || || ||||| | || ||||| || | Sbjct 585882 AAGTCCGAGGTTTTCTCTACCTTCTCCGACAACCAGCCCGGTGTGCTCATTCAGGTCTAC 585941 Query 350516 GAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAA 350575 || ||||| ||| ||||| || || || || | || ||||| || | | Sbjct 585942 GAGGGTGAGCGTCAACGCACCAAGGACAACAACCTTATGGGTAAATTTGAGCTTACCGGT 586001 Query 350576 ATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAAT 350635 || || || |||| | || || ||||| ||||| || | |||||| ||||| | || Sbjct 586002 ATCCCGCCTGCGCCTCGTGGTGTGCCTCAAATTGAGGTTACATTCGATCTTGATGCCAAC 586061 Query 350636 GGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||||| | || ||| |||| || || || Sbjct 586062 GGTATCATGAACGTTTCCGCTGTCGAGAA 586090 >seq37 Length=2347807 Score = 147 bits (162), Expect = 7e-30 Identities = 174/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || ||||| ||||| || ||||| ||||| || | Sbjct 2330644 TTTGCATCCCACCGCGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGT 2330703 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | || || ||||| |||||||| || ||||||||||| || || ||||||| Sbjct 2330704 AGTCAGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGAT 2330763 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || |||||||| || || | || |||||||| || | || || | Sbjct 2330764 CTGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTATCGATAGTGTCCGACG 2330823 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || | ||||| ||||| || || || || ||||| |||||| Sbjct 2330824 ACTCGACCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || ||||| ||||| || ||||| ||||| || | Sbjct 2330872 TTTGCATTCCACCGCGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGT 2330931 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| |||||||| || |||||||||||||| || ||||| | Sbjct 2330932 AGTCGGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGT 2330991 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || ||||| ||||| || | || || || ||||| | |||||| | Sbjct 2330992 CTGGGGGGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGG 2331051 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||| ||||| || || || ||||| || || |||||||| Sbjct 2331052 ACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || ||||| | || ||||| | || || || |||||| || || || || ||||| Sbjct 2330424 CCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAG 2330483 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || || || || || || ||||| ||||| || || || ||||| ||||||||| Sbjct 2330484 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGA 2330543 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || ||||||||||| || | || |||||||| || | || || | || ||| Sbjct 2330544 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACT 2330603 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||| ||||| || || || || ||||| ||||| Sbjct 2330604 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Score = 123 bits (136), Expect = 8e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | || ||||| || || || ||||| |||||||| || || || Sbjct 2331104 CATGCCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTC 2331163 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || || || || ||||| || ||||||||||| || || |||||||| || Sbjct 2331164 CGACAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGG 2331223 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || || | || || | || Sbjct 2331224 GGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTC 2331283 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || ||||| || || |||||||| Sbjct 2331284 GACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCAT 2331334 >seq23 Length=3455761 Score = 84.2 bits (92), Expect = 7e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 378211 GCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATT 378270 ||||| | | |||||| ||| ||||| || | || || || ||||||||||| Sbjct 1770849 GCTTTCACCAATCGTCGCTGAATGTAACCCGTCTCGGCGGTCTTGACGGCAGTATCAATC 1770790 Query 378271 AAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATA 378330 || || | || ||| |||| ||||||||| | ||||||| || || || || | | | Sbjct 1770789 AATCCTTCTCGTCCAGCCATGGCATGGAAGTAGAATTCAGACGGGGTGAGACCTCTCAGA 1770730 Query 378331 AATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGT 378390 | || |||| | || || | || | || |||| ||| | || || ||||||| Sbjct 1770729 TACGAGTTCTCCACGAAACCACGGGCCTCGGGTGAATAATCGTCCTTGGTGAAATGAGGA 1770670 Query 378391 AATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACC 378446 | ||| || | || || || | ||||| |||||||| |||||| ||| || || Sbjct 1770669 AGTGTTCGGTACTTGAATCCGAAAGGAATACGTTTTCCCTCAACAACCTGCTGTCC 1770614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253681674711